Difference between revisions of "1.3.7.2-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.3.7.2-RXN 1.3.7.2-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** 15,16-dihydrobiliverdin...")
 
 
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* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
−
* common name:
 
−
** 15,16-dihydrobiliverdin:ferredoxin oxidoreductase
 
 
* ec number:
 
* ec number:
 
** [http://enzyme.expasy.org/EC/1.3.7.2 EC-1.3.7.2]
 
** [http://enzyme.expasy.org/EC/1.3.7.2 EC-1.3.7.2]
 +
* common name:
 +
** 15,16-dihydrobiliverdin:ferredoxin oxidoreductase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 2 [[PROTON]][c] '''+''' 2 [[Reduced-ferredoxins]][c] '''+''' 1 [[BILIVERDINE]][c] '''=>''' 2 [[Oxidized-ferredoxins]][c] '''+''' 1 [[1516-DIHYDROBILIVERDIN]][c]
+
** 1 [[BILIVERDINE]][c] '''+''' 2 [[Reduced-ferredoxins]][c] '''+''' 2 [[PROTON]][c] '''=>''' 1 [[1516-DIHYDROBILIVERDIN]][c] '''+''' 2 [[Oxidized-ferredoxins]][c]
 
* With common name(s):
 
* With common name(s):
−
** 2 H+[c] '''+''' 2 a reduced ferredoxin [iron-sulfur] cluster[c] '''+''' 1 biliverdin-IX-α[c] '''=>''' 2 an oxidized ferredoxin [iron-sulfur] cluster[c] '''+''' 1 15,16-dihydrobiliverdin[c]
+
** 1 biliverdin-IX-α[c] '''+''' 2 a reduced ferredoxin [iron-sulfur] cluster[c] '''+''' 2 H+[c] '''=>''' 1 15,16-dihydrobiliverdin[c] '''+''' 2 an oxidized ferredoxin [iron-sulfur] cluster[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[SJ04340]]
+
* Gene: [[SJ03344]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
−
* Gene: [[SJ03344]]
+
* Gene: [[SJ04340]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-7579]], phycourobilin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7579 PWY-7579]
 
−
** '''4''' reactions found over '''5''' reactions in the full pathway
 
 
* [[PWY-5915]], phycoerythrobilin biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5915 PWY-5915]
 
* [[PWY-5915]], phycoerythrobilin biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5915 PWY-5915]
−
** '''4''' reactions found over '''4''' reactions in the full pathway
+
** '''3''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-7579]], phycourobilin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7579 PWY-7579]
 +
** '''3''' reactions found over '''5''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[annotation]]
 
* Category: [[annotation]]
Line 33: Line 33:
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10170 10170]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
 
** [http://www.genome.jp/dbget-bin/www_bget?R05818 R05818]
 
** [http://www.genome.jp/dbget-bin/www_bget?R05818 R05818]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=15,16-dihydrobiliverdin:ferredoxin oxidoreductase}}
 
 
{{#set: ec number=EC-1.3.7.2}}
 
{{#set: ec number=EC-1.3.7.2}}
−
{{#set: gene associated=SJ04340|SJ03344}}
+
{{#set: common name=15,16-dihydrobiliverdin:ferredoxin oxidoreductase}}
−
{{#set: in pathway=PWY-7579|PWY-5915}}
+
{{#set: gene associated=SJ03344|SJ04340}}
 +
{{#set: in pathway=PWY-5915|PWY-7579}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction source=annotation-saccharina_japonica_genome}}
 
{{#set: reconstruction source=annotation-saccharina_japonica_genome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 11:18, 10 January 2019

Reaction 1.3.7.2-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • common name:
    • 15,16-dihydrobiliverdin:ferredoxin oxidoreductase
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5915, phycoerythrobilin biosynthesis I: PWY-5915
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-7579, phycourobilin biosynthesis: PWY-7579
    • 3 reactions found over 5 reactions in the full pathway

Reconstruction information

External links





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