Difference between revisions of "RXN-6622"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-6622 RXN-6622] == * direction: ** LEFT-TO-RIGHT * common name: ** cytosolic dipeptidase * ec nu...")
 
 
Line 3: Line 3:
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
−
* common name:
 
−
** cytosolic dipeptidase
 
 
* ec number:
 
* ec number:
 
** [http://enzyme.expasy.org/EC/3.4.13.18 EC-3.4.13.18]
 
** [http://enzyme.expasy.org/EC/3.4.13.18 EC-3.4.13.18]
 +
* common name:
 +
** cytosolic dipeptidase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[WATER]][c] '''+''' 1 [[CYS-GLY]][c] '''=>''' 1 [[CYS]][c] '''+''' 1 [[GLY]][c]
+
** 1 [[CYS-GLY]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CYS]][c] '''+''' 1 [[GLY]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 H2O[c] '''+''' 1 L-cysteinyl-glycine[c] '''=>''' 1 L-cysteine[c] '''+''' 1 glycine[c]
+
** 1 L-cysteinyl-glycine[c] '''+''' 1 H2O[c] '''=>''' 1 L-cysteine[c] '''+''' 1 glycine[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[SJ21020]]
 
−
** Source: [[orthology-ectocarpus_siliculosus]]
 
−
** Source: [[orthology-nannochloropsis_salina]]
 
−
** Source: [[orthology-arabidopsis_thaliana]]
 
 
* Gene: [[SJ11013]]
 
* Gene: [[SJ11013]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ00234]]
 
−
** Source: [[orthology-nannochloropsis_salina]]
 
 
* Gene: [[SJ21022]]
 
* Gene: [[SJ21022]]
 +
** Source: [[orthology-nannochloropsis_salina]]
 +
** Source: [[orthology-arabidopsis_thaliana]]
 
** Source: [[orthology-ectocarpus_siliculosus]]
 
** Source: [[orthology-ectocarpus_siliculosus]]
 +
* Gene: [[SJ00234]]
 +
** Source: [[orthology-nannochloropsis_salina]]
 +
* Gene: [[SJ21020]]
 
** Source: [[orthology-nannochloropsis_salina]]
 
** Source: [[orthology-nannochloropsis_salina]]
 
** Source: [[orthology-arabidopsis_thaliana]]
 
** Source: [[orthology-arabidopsis_thaliana]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 
* Gene: [[SJ21032]]
 
* Gene: [[SJ21032]]
 
** Source: [[orthology-nannochloropsis_salina]]
 
** Source: [[orthology-nannochloropsis_salina]]
 
== Pathways  ==
 
== Pathways  ==
 +
* [[PWY-7559]]: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7559 PWY-7559]
 +
** '''2''' reactions found over '''2''' reactions in the full pathway
 
* [[PWY-4041]], γ-glutamyl cycle: [http://metacyc.org/META/NEW-IMAGE?object=PWY-4041 PWY-4041]
 
* [[PWY-4041]], γ-glutamyl cycle: [http://metacyc.org/META/NEW-IMAGE?object=PWY-4041 PWY-4041]
 
** '''5''' reactions found over '''6''' reactions in the full pathway
 
** '''5''' reactions found over '''6''' reactions in the full pathway
−
* [[PWY-7559]]: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7559 PWY-7559]
 
−
** '''1''' reactions found over '''2''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
 
** Source: [[orthology-arabidopsis_thaliana]]
 
** Source: [[orthology-arabidopsis_thaliana]]
−
*** Tool: [[pantograph]]
 
−
** Source: [[orthology-ectocarpus_siliculosus]]
 
 
*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
 
** Source: [[orthology-nannochloropsis_salina]]
 
** Source: [[orthology-nannochloropsis_salina]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 
*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
 
* Category: [[annotation]]
 
* Category: [[annotation]]
Line 50: Line 50:
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28783 28783]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28784 28784]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
 
** [http://www.genome.jp/dbget-bin/www_bget?R00899 R00899]
 
** [http://www.genome.jp/dbget-bin/www_bget?R00899 R00899]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=cytosolic dipeptidase}}
 
 
{{#set: ec number=EC-3.4.13.18}}
 
{{#set: ec number=EC-3.4.13.18}}
−
{{#set: gene associated=SJ21020|SJ11013|SJ00234|SJ21022|SJ21032}}
+
{{#set: common name=cytosolic dipeptidase}}
−
{{#set: in pathway=PWY-4041|PWY-7559}}
+
{{#set: gene associated=SJ11013|SJ21022|SJ00234|SJ21020|SJ21032}}
 +
{{#set: in pathway=PWY-7559|PWY-4041}}
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction source=orthology-arabidopsis_thaliana|orthology-ectocarpus_siliculosus|orthology-nannochloropsis_salina|annotation-saccharina_japonica_genome}}
 
{{#set: reconstruction source=orthology-arabidopsis_thaliana|orthology-ectocarpus_siliculosus|orthology-nannochloropsis_salina|annotation-saccharina_japonica_genome}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 12:19, 10 January 2019

Reaction RXN-6622

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • common name:
    • cytosolic dipeptidase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 L-cysteinyl-glycine[c] + 1 H2O[c] => 1 L-cysteine[c] + 1 glycine[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7559: PWY-7559
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-4041, γ-glutamyl cycle: PWY-4041
    • 5 reactions found over 6 reactions in the full pathway

Reconstruction information

External links





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