Difference between revisions of "MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS] == * taxonomic range: ** [...")
 
 
Line 4: Line 4:
 
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759]
 
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759]
 
* common name:
 
* common name:
−
** protein N-glycosylation (eukaryotic, high mannose)
+
** protein N-glycosylation initial phase (eukaryotic)
 
* Synonym(s):
 
* Synonym(s):
 
** mannosyl-chito-dolichol biosynthesis
 
** mannosyl-chito-dolichol biosynthesis
−
** eukaryotic N-linked glycosylation
+
** eukaryotic N-linked glycosylation initial steps
 
** dolichyl-diphosphooligosaccharide biosynthesis and attachment
 
** dolichyl-diphosphooligosaccharide biosynthesis and attachment
  
 
== Reaction(s) found ==
 
== Reaction(s) found ==
−
  '''19''' reactions found over '''19''' reactions in the full pathway
+
  '''16''' reactions found over '''19''' reactions in the full pathway
 
* [[2.4.1.117-RXN]]
 
* [[2.4.1.117-RXN]]
 
** 1 associated gene(s):
 
** 1 associated gene(s):
Line 17: Line 17:
 
** 3 reconstruction source(s) associated:
 
** 3 reconstruction source(s) associated:
 
*** [[orthology-arabidopsis_thaliana]]
 
*** [[orthology-arabidopsis_thaliana]]
−
*** [[orthology-ectocarpus_siliculosus]]
 
 
*** [[annotation-saccharina_japonica_genome]]
 
*** [[annotation-saccharina_japonica_genome]]
 +
*** [[orthology-ectocarpus_siliculosus]]
 
* [[2.4.1.119-RXN]]
 
* [[2.4.1.119-RXN]]
 
** 6 associated gene(s):
 
** 6 associated gene(s):
 +
*** [[SJ04308]]
 
*** [[SJ18586]]
 
*** [[SJ18586]]
−
*** [[SJ12004]]
 
 
*** [[SJ19404]]
 
*** [[SJ19404]]
 +
*** [[SJ12004]]
 
*** [[SJ02055]]
 
*** [[SJ02055]]
 
*** [[SJ08534]]
 
*** [[SJ08534]]
−
*** [[SJ04308]]
 
 
** 2 reconstruction source(s) associated:
 
** 2 reconstruction source(s) associated:
 +
*** [[annotation-saccharina_japonica_genome]]
 
*** [[orthology-ectocarpus_siliculosus]]
 
*** [[orthology-ectocarpus_siliculosus]]
−
*** [[annotation-saccharina_japonica_genome]]
 
 
* [[2.4.1.141-RXN]]
 
* [[2.4.1.141-RXN]]
 
** 1 associated gene(s):
 
** 1 associated gene(s):
Line 37: Line 37:
 
* [[2.4.1.142-RXN]]
 
* [[2.4.1.142-RXN]]
 
** 2 associated gene(s):
 
** 2 associated gene(s):
 +
*** [[SJ14919]]
 
*** [[SJ14920]]
 
*** [[SJ14920]]
−
*** [[SJ14919]]
 
 
** 2 reconstruction source(s) associated:
 
** 2 reconstruction source(s) associated:
 +
*** [[annotation-saccharina_japonica_genome]]
 
*** [[orthology-ectocarpus_siliculosus]]
 
*** [[orthology-ectocarpus_siliculosus]]
−
*** [[annotation-saccharina_japonica_genome]]
 
 
* [[2.4.1.83-RXN]]
 
* [[2.4.1.83-RXN]]
 
** 2 associated gene(s):
 
** 2 associated gene(s):
Line 47: Line 47:
 
*** [[SJ17231]]
 
*** [[SJ17231]]
 
** 2 reconstruction source(s) associated:
 
** 2 reconstruction source(s) associated:
−
*** [[orthology-ectocarpus_siliculosus]]
 
 
*** [[annotation-saccharina_japonica_genome]]
 
*** [[annotation-saccharina_japonica_genome]]
 +
*** [[orthology-ectocarpus_siliculosus]]
 
* [[2.7.8.15-RXN]]
 
* [[2.7.8.15-RXN]]
 
** 1 associated gene(s):
 
** 1 associated gene(s):
Line 54: Line 54:
 
** 3 reconstruction source(s) associated:
 
** 3 reconstruction source(s) associated:
 
*** [[orthology-arabidopsis_thaliana]]
 
*** [[orthology-arabidopsis_thaliana]]
 +
*** [[annotation-saccharina_japonica_genome]]
 
*** [[orthology-ectocarpus_siliculosus]]
 
*** [[orthology-ectocarpus_siliculosus]]
−
*** [[annotation-saccharina_japonica_genome]]
 
−
* [[RXN-16592]]
 
−
** 0 associated gene:
 
−
** 1 reconstruction source(s) associated:
 
−
*** [[annotation-saccharina_japonica_genome]]
 
−
* [[RXN-16593]]
 
−
** 0 associated gene:
 
−
** 1 reconstruction source(s) associated:
 
−
*** [[annotation-saccharina_japonica_genome]]
 
−
* [[RXN-16594]]
 
−
** 0 associated gene:
 
−
** 1 reconstruction source(s) associated:
 
−
*** [[annotation-saccharina_japonica_genome]]
 
 
* [[RXN-5462]]
 
* [[RXN-5462]]
 
** 1 associated gene(s):
 
** 1 associated gene(s):
 
*** [[SJ17680]]
 
*** [[SJ17680]]
 
** 2 reconstruction source(s) associated:
 
** 2 reconstruction source(s) associated:
 +
*** [[annotation-saccharina_japonica_genome]]
 
*** [[orthology-ectocarpus_siliculosus]]
 
*** [[orthology-ectocarpus_siliculosus]]
−
*** [[annotation-saccharina_japonica_genome]]
 
 
* [[RXN-5463]]
 
* [[RXN-5463]]
 
** 1 associated gene(s):
 
** 1 associated gene(s):
Line 81: Line 69:
 
* [[RXN-5464]]
 
* [[RXN-5464]]
 
** 2 associated gene(s):
 
** 2 associated gene(s):
−
*** [[SJ05950]]
 
 
*** [[SJ11238]]
 
*** [[SJ11238]]
 +
*** [[SJ05950]]
 
** 2 reconstruction source(s) associated:
 
** 2 reconstruction source(s) associated:
−
*** [[orthology-ectocarpus_siliculosus]]
 
 
*** [[annotation-saccharina_japonica_genome]]
 
*** [[annotation-saccharina_japonica_genome]]
 +
*** [[orthology-ectocarpus_siliculosus]]
 
* [[RXN-5466]]
 
* [[RXN-5466]]
 
** 1 associated gene(s):
 
** 1 associated gene(s):
 
*** [[SJ11915]]
 
*** [[SJ11915]]
 
** 2 reconstruction source(s) associated:
 
** 2 reconstruction source(s) associated:
−
*** [[orthology-ectocarpus_siliculosus]]
 
 
*** [[annotation-saccharina_japonica_genome]]
 
*** [[annotation-saccharina_japonica_genome]]
 +
*** [[orthology-ectocarpus_siliculosus]]
 
* [[RXN-5467]]
 
* [[RXN-5467]]
 
** 2 associated gene(s):
 
** 2 associated gene(s):
−
*** [[SJ11915]]
 
 
*** [[SJ19084]]
 
*** [[SJ19084]]
 +
*** [[SJ11915]]
 
** 2 reconstruction source(s) associated:
 
** 2 reconstruction source(s) associated:
−
*** [[orthology-ectocarpus_siliculosus]]
 
 
*** [[annotation-saccharina_japonica_genome]]
 
*** [[annotation-saccharina_japonica_genome]]
 +
*** [[orthology-ectocarpus_siliculosus]]
 
* [[RXN-5468]]
 
* [[RXN-5468]]
 
** 3 associated gene(s):
 
** 3 associated gene(s):
 +
*** [[SJ11524]]
 
*** [[SJ11915]]
 
*** [[SJ11915]]
 
*** [[SJ11523]]
 
*** [[SJ11523]]
−
*** [[SJ11524]]
 
 
** 2 reconstruction source(s) associated:
 
** 2 reconstruction source(s) associated:
 +
*** [[annotation-saccharina_japonica_genome]]
 
*** [[orthology-ectocarpus_siliculosus]]
 
*** [[orthology-ectocarpus_siliculosus]]
−
*** [[annotation-saccharina_japonica_genome]]
 
 
* [[RXN-5469]]
 
* [[RXN-5469]]
 
** 2 associated gene(s):
 
** 2 associated gene(s):
Line 112: Line 100:
 
*** [[SJ11915]]
 
*** [[SJ11915]]
 
** 2 reconstruction source(s) associated:
 
** 2 reconstruction source(s) associated:
 +
*** [[annotation-saccharina_japonica_genome]]
 
*** [[orthology-ectocarpus_siliculosus]]
 
*** [[orthology-ectocarpus_siliculosus]]
−
*** [[annotation-saccharina_japonica_genome]]
 
 
* [[RXN-5470]]
 
* [[RXN-5470]]
 
** 2 associated gene(s):
 
** 2 associated gene(s):
 +
*** [[SJ18634]]
 
*** [[SJ10727]]
 
*** [[SJ10727]]
−
*** [[SJ18634]]
 
 
** 1 reconstruction source(s) associated:
 
** 1 reconstruction source(s) associated:
 
*** [[annotation-saccharina_japonica_genome]]
 
*** [[annotation-saccharina_japonica_genome]]
Line 129: Line 117:
 
*** [[SJ02934]]
 
*** [[SJ02934]]
 
** 2 reconstruction source(s) associated:
 
** 2 reconstruction source(s) associated:
−
*** [[orthology-ectocarpus_siliculosus]]
 
 
*** [[annotation-saccharina_japonica_genome]]
 
*** [[annotation-saccharina_japonica_genome]]
 +
*** [[orthology-ectocarpus_siliculosus]]
 
== Reaction(s) not found ==
 
== Reaction(s) not found ==
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-16592 RXN-16592]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-16593 RXN-16593]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-16594 RXN-16594]
 
== External links  ==
 
== External links  ==
 
{{#set: taxonomic range=TAX-2759}}
 
{{#set: taxonomic range=TAX-2759}}
−
{{#set: common name=protein N-glycosylation (eukaryotic, high mannose)}}
+
{{#set: common name=protein N-glycosylation initial phase (eukaryotic)}}
−
{{#set: common name=mannosyl-chito-dolichol biosynthesis|eukaryotic N-linked glycosylation|dolichyl-diphosphooligosaccharide biosynthesis and attachment}}
+
{{#set: common name=mannosyl-chito-dolichol biosynthesis|eukaryotic N-linked glycosylation initial steps|dolichyl-diphosphooligosaccharide biosynthesis and attachment}}
−
{{#set: reaction found=19}}
+
{{#set: reaction found=16}}
 
{{#set: total reaction=19}}
 
{{#set: total reaction=19}}
−
{{#set: completion rate=100.0}}
+
{{#set: completion rate=84.0}}

Latest revision as of 12:20, 10 January 2019

Pathway MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS

  • taxonomic range:
  • common name:
    • protein N-glycosylation initial phase (eukaryotic)
  • Synonym(s):
    • mannosyl-chito-dolichol biosynthesis
    • eukaryotic N-linked glycosylation initial steps
    • dolichyl-diphosphooligosaccharide biosynthesis and attachment

Reaction(s) found

16 reactions found over 19 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/sjapgem/index.php?title=MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS&oldid=14994"