Difference between revisions of "GLUCONEO-PWY"
From metabolic_network
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=GLUCONEO-PWY GLUCONEO-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-475...") |
|||
Line 11: | Line 11: | ||
== Reaction(s) found == | == Reaction(s) found == | ||
− | ''' | + | '''12''' reactions found over '''13''' reactions in the full pathway |
* [[1.1.1.39-RXN]] | * [[1.1.1.39-RXN]] | ||
** 3 associated gene(s): | ** 3 associated gene(s): | ||
− | |||
*** [[SJ13180]] | *** [[SJ13180]] | ||
*** [[SJ11643]] | *** [[SJ11643]] | ||
+ | *** [[SJ14191]] | ||
** 2 reconstruction source(s) associated: | ** 2 reconstruction source(s) associated: | ||
− | |||
*** [[annotation-saccharina_japonica_genome]] | *** [[annotation-saccharina_japonica_genome]] | ||
+ | *** [[orthology-ectocarpus_siliculosus]] | ||
* [[2PGADEHYDRAT-RXN]] | * [[2PGADEHYDRAT-RXN]] | ||
** 3 associated gene(s): | ** 3 associated gene(s): | ||
− | |||
*** [[SJ08386]] | *** [[SJ08386]] | ||
*** [[SJ17529]] | *** [[SJ17529]] | ||
+ | *** [[SJ13450]] | ||
** 4 reconstruction source(s) associated: | ** 4 reconstruction source(s) associated: | ||
*** [[orthology-arabidopsis_thaliana]] | *** [[orthology-arabidopsis_thaliana]] | ||
− | |||
− | |||
*** [[annotation-saccharina_japonica_genome]] | *** [[annotation-saccharina_japonica_genome]] | ||
+ | *** [[orthology-nannochloropsis_salina]] | ||
+ | *** [[orthology-ectocarpus_siliculosus]] | ||
* [[3PGAREARR-RXN]] | * [[3PGAREARR-RXN]] | ||
** 12 associated gene(s): | ** 12 associated gene(s): | ||
− | |||
*** [[SJ16156]] | *** [[SJ16156]] | ||
− | |||
− | |||
*** [[SJ21024]] | *** [[SJ21024]] | ||
− | |||
− | |||
− | |||
− | |||
*** [[SJ01345]] | *** [[SJ01345]] | ||
+ | *** [[SJ09590]] | ||
*** [[SJ14984]] | *** [[SJ14984]] | ||
+ | *** [[SJ13678]] | ||
+ | *** [[SJ14916]] | ||
+ | *** [[SJ15529]] | ||
+ | *** [[SJ21685]] | ||
*** [[SJ14704]] | *** [[SJ14704]] | ||
+ | *** [[SJ12497]] | ||
+ | *** [[SJ12299]] | ||
** 4 reconstruction source(s) associated: | ** 4 reconstruction source(s) associated: | ||
*** [[orthology-arabidopsis_thaliana]] | *** [[orthology-arabidopsis_thaliana]] | ||
+ | *** [[annotation-saccharina_japonica_genome]] | ||
+ | *** [[orthology-nannochloropsis_salina]] | ||
*** [[orthology-ectocarpus_siliculosus]] | *** [[orthology-ectocarpus_siliculosus]] | ||
− | |||
− | |||
* [[F16ALDOLASE-RXN]] | * [[F16ALDOLASE-RXN]] | ||
** 5 associated gene(s): | ** 5 associated gene(s): | ||
− | |||
*** [[SJ22520]] | *** [[SJ22520]] | ||
*** [[SJ12479]] | *** [[SJ12479]] | ||
− | |||
*** [[SJ13560]] | *** [[SJ13560]] | ||
+ | *** [[SJ17964]] | ||
+ | *** [[SJ21513]] | ||
** 3 reconstruction source(s) associated: | ** 3 reconstruction source(s) associated: | ||
− | |||
− | |||
*** [[annotation-saccharina_japonica_genome]] | *** [[annotation-saccharina_japonica_genome]] | ||
+ | *** [[orthology-nannochloropsis_salina]] | ||
+ | *** [[orthology-ectocarpus_siliculosus]] | ||
* [[F16BDEPHOS-RXN]] | * [[F16BDEPHOS-RXN]] | ||
** 7 associated gene(s): | ** 7 associated gene(s): | ||
+ | *** [[SJ14175]] | ||
+ | *** [[SJ16950]] | ||
+ | *** [[SJ17320]] | ||
+ | *** [[SJ13518]] | ||
*** [[SJ14821]] | *** [[SJ14821]] | ||
*** [[SJ10463]] | *** [[SJ10463]] | ||
− | |||
− | |||
− | |||
*** [[SJ20807]] | *** [[SJ20807]] | ||
− | |||
** 4 reconstruction source(s) associated: | ** 4 reconstruction source(s) associated: | ||
*** [[orthology-arabidopsis_thaliana]] | *** [[orthology-arabidopsis_thaliana]] | ||
+ | *** [[annotation-saccharina_japonica_genome]] | ||
+ | *** [[orthology-nannochloropsis_salina]] | ||
*** [[orthology-ectocarpus_siliculosus]] | *** [[orthology-ectocarpus_siliculosus]] | ||
− | |||
− | |||
* [[GAPOXNPHOSPHN-RXN]] | * [[GAPOXNPHOSPHN-RXN]] | ||
** 5 associated gene(s): | ** 5 associated gene(s): | ||
+ | *** [[SJ05204]] | ||
+ | *** [[SJ07665]] | ||
*** [[SJ00348]] | *** [[SJ00348]] | ||
*** [[SJ05251]] | *** [[SJ05251]] | ||
− | |||
*** [[SJ14154]] | *** [[SJ14154]] | ||
− | |||
** 4 reconstruction source(s) associated: | ** 4 reconstruction source(s) associated: | ||
*** [[orthology-arabidopsis_thaliana]] | *** [[orthology-arabidopsis_thaliana]] | ||
+ | *** [[annotation-saccharina_japonica_genome]] | ||
+ | *** [[orthology-nannochloropsis_salina]] | ||
*** [[orthology-ectocarpus_siliculosus]] | *** [[orthology-ectocarpus_siliculosus]] | ||
− | |||
− | |||
* [[MALATE-DEH-RXN]] | * [[MALATE-DEH-RXN]] | ||
** 3 associated gene(s): | ** 3 associated gene(s): | ||
+ | *** [[SJ15746]] | ||
+ | *** [[SJ05075]] | ||
*** [[SJ15523]] | *** [[SJ15523]] | ||
− | |||
− | |||
** 4 reconstruction source(s) associated: | ** 4 reconstruction source(s) associated: | ||
*** [[orthology-arabidopsis_thaliana]] | *** [[orthology-arabidopsis_thaliana]] | ||
+ | *** [[annotation-saccharina_japonica_genome]] | ||
+ | *** [[orthology-nannochloropsis_salina]] | ||
*** [[orthology-ectocarpus_siliculosus]] | *** [[orthology-ectocarpus_siliculosus]] | ||
− | |||
− | |||
* [[MALIC-NADP-RXN]] | * [[MALIC-NADP-RXN]] | ||
** 3 associated gene(s): | ** 3 associated gene(s): | ||
− | |||
*** [[SJ14191]] | *** [[SJ14191]] | ||
*** [[SJ13180]] | *** [[SJ13180]] | ||
+ | *** [[SJ11643]] | ||
** 3 reconstruction source(s) associated: | ** 3 reconstruction source(s) associated: | ||
*** [[orthology-arabidopsis_thaliana]] | *** [[orthology-arabidopsis_thaliana]] | ||
− | |||
*** [[annotation-saccharina_japonica_genome]] | *** [[annotation-saccharina_japonica_genome]] | ||
+ | *** [[orthology-ectocarpus_siliculosus]] | ||
* [[PEPCARBOXYKIN-RXN]] | * [[PEPCARBOXYKIN-RXN]] | ||
** 1 associated gene(s): | ** 1 associated gene(s): | ||
Line 110: | Line 110: | ||
** 4 reconstruction source(s) associated: | ** 4 reconstruction source(s) associated: | ||
*** [[orthology-arabidopsis_thaliana]] | *** [[orthology-arabidopsis_thaliana]] | ||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
*** [[annotation-saccharina_japonica_genome]] | *** [[annotation-saccharina_japonica_genome]] | ||
+ | *** [[orthology-nannochloropsis_salina]] | ||
+ | *** [[orthology-ectocarpus_siliculosus]] | ||
* [[PGLUCISOM-RXN]] | * [[PGLUCISOM-RXN]] | ||
** 2 associated gene(s): | ** 2 associated gene(s): | ||
Line 122: | Line 118: | ||
*** [[SJ08179]] | *** [[SJ08179]] | ||
** 2 reconstruction source(s) associated: | ** 2 reconstruction source(s) associated: | ||
− | |||
*** [[annotation-saccharina_japonica_genome]] | *** [[annotation-saccharina_japonica_genome]] | ||
+ | *** [[orthology-ectocarpus_siliculosus]] | ||
* [[PHOSGLYPHOS-RXN]] | * [[PHOSGLYPHOS-RXN]] | ||
** 6 associated gene(s): | ** 6 associated gene(s): | ||
− | |||
− | |||
− | |||
*** [[SJ15992]] | *** [[SJ15992]] | ||
− | *** [[ | + | *** [[SJ05024]] |
*** [[SJ15991]] | *** [[SJ15991]] | ||
+ | *** [[SJ18020]] | ||
+ | *** [[SJ15971]] | ||
+ | *** [[SJ10780]] | ||
** 4 reconstruction source(s) associated: | ** 4 reconstruction source(s) associated: | ||
*** [[orthology-arabidopsis_thaliana]] | *** [[orthology-arabidopsis_thaliana]] | ||
− | |||
− | |||
*** [[annotation-saccharina_japonica_genome]] | *** [[annotation-saccharina_japonica_genome]] | ||
+ | *** [[orthology-nannochloropsis_salina]] | ||
+ | *** [[orthology-ectocarpus_siliculosus]] | ||
* [[TRIOSEPISOMERIZATION-RXN]] | * [[TRIOSEPISOMERIZATION-RXN]] | ||
** 5 associated gene(s): | ** 5 associated gene(s): | ||
+ | *** [[SJ10351]] | ||
+ | *** [[SJ11011]] | ||
*** [[SJ15388]] | *** [[SJ15388]] | ||
*** [[SJ07665]] | *** [[SJ07665]] | ||
− | |||
*** [[SJ21027]] | *** [[SJ21027]] | ||
− | |||
** 4 reconstruction source(s) associated: | ** 4 reconstruction source(s) associated: | ||
*** [[orthology-arabidopsis_thaliana]] | *** [[orthology-arabidopsis_thaliana]] | ||
− | |||
− | |||
*** [[annotation-saccharina_japonica_genome]] | *** [[annotation-saccharina_japonica_genome]] | ||
+ | *** [[orthology-nannochloropsis_salina]] | ||
+ | *** [[orthology-ectocarpus_siliculosus]] | ||
== Reaction(s) not found == | == Reaction(s) not found == | ||
+ | * [http://metacyc.org/META/NEW-IMAGE?object=PEPSYNTH-RXN PEPSYNTH-RXN] | ||
== External links == | == External links == | ||
− | |||
− | |||
* ARACYC: | * ARACYC: | ||
** [http://metacyc.org/ARA/NEW-IMAGE?object=GLUCONEO-PWY GLUCONEO-PWY] | ** [http://metacyc.org/ARA/NEW-IMAGE?object=GLUCONEO-PWY GLUCONEO-PWY] | ||
+ | * ECOCYC: | ||
+ | ** [http://metacyc.org/ECOLI/NEW-IMAGE?object=GLUCONEO-PWY GLUCONEO-PWY] | ||
{{#set: taxonomic range=TAX-4751}} | {{#set: taxonomic range=TAX-4751}} | ||
{{#set: taxonomic range=TAX-33090}} | {{#set: taxonomic range=TAX-33090}} | ||
Line 160: | Line 157: | ||
{{#set: taxonomic range=TAX-2}} | {{#set: taxonomic range=TAX-2}} | ||
{{#set: common name=gluconeogenesis I}} | {{#set: common name=gluconeogenesis I}} | ||
− | {{#set: reaction found= | + | {{#set: reaction found=12}} |
{{#set: total reaction=13}} | {{#set: total reaction=13}} | ||
− | {{#set: completion rate= | + | {{#set: completion rate=92.0}} |
Latest revision as of 12:29, 10 January 2019
Pathway GLUCONEO-PWY
Reaction(s) found
12 reactions found over 13 reactions in the full pathway
- 1.1.1.39-RXN
- 3 associated gene(s):
- 2 reconstruction source(s) associated:
- 2PGADEHYDRAT-RXN
- 3 associated gene(s):
- 4 reconstruction source(s) associated:
- 3PGAREARR-RXN
- 12 associated gene(s):
- 4 reconstruction source(s) associated:
- F16ALDOLASE-RXN
- 5 associated gene(s):
- 3 reconstruction source(s) associated:
- F16BDEPHOS-RXN
- 7 associated gene(s):
- 4 reconstruction source(s) associated:
- GAPOXNPHOSPHN-RXN
- 5 associated gene(s):
- 4 reconstruction source(s) associated:
- MALATE-DEH-RXN
- 3 associated gene(s):
- 4 reconstruction source(s) associated:
- MALIC-NADP-RXN
- 3 associated gene(s):
- 3 reconstruction source(s) associated:
- PEPCARBOXYKIN-RXN
- 1 associated gene(s):
- 4 reconstruction source(s) associated:
- PGLUCISOM-RXN
- 2 associated gene(s):
- 2 reconstruction source(s) associated:
- PHOSGLYPHOS-RXN
- 6 associated gene(s):
- 4 reconstruction source(s) associated:
- TRIOSEPISOMERIZATION-RXN
- 5 associated gene(s):
- 4 reconstruction source(s) associated:
Reaction(s) not found
External links
- ARACYC:
- ECOCYC: