Difference between revisions of "RXN-11244"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11244 RXN-11244] == * direction: ** LEFT-TO-RIGHT * common name: ** 4-coumaroyl-CoA hydratase *...") |
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* direction: | * direction: | ||
** LEFT-TO-RIGHT | ** LEFT-TO-RIGHT | ||
| − | |||
| − | |||
| − | |||
* ec number: | * ec number: | ||
** [http://enzyme.expasy.org/EC/4.2.1.17 EC-4.2.1.17] | ** [http://enzyme.expasy.org/EC/4.2.1.17 EC-4.2.1.17] | ||
| + | * common name: | ||
| + | ** enoyl-CoA hydratase | ||
| + | ** 4-coumaroyl-CoA hydratase | ||
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
| − | ** 1 [[ | + | ** 1 [[P-COUMAROYL-COA]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CPD-12199]][c] |
* With common name(s): | * With common name(s): | ||
| − | ** 1 | + | ** 1 4-coumaroyl-CoA[c] '''+''' 1 H2O[c] '''=>''' 1 3S-(4-hydroxyphenyl)-3-hydroxy-propanoyl-CoA[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Genes have been associated with this reaction based on different elements listed below. | Genes have been associated with this reaction based on different elements listed below. | ||
| − | * Gene: [[ | + | * Gene: [[SJ10275]] |
| − | + | ||
| − | + | ||
** Source: [[orthology-ectocarpus_siliculosus]] | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
| + | * Gene: [[SJ03584]] | ||
| + | ** Source: [[annotation-saccharina_japonica_genome]] | ||
| + | *** Assignment: GO-TERM | ||
* Gene: [[SJ14591]] | * Gene: [[SJ14591]] | ||
** Source: [[annotation-saccharina_japonica_genome]] | ** Source: [[annotation-saccharina_japonica_genome]] | ||
*** Assignment: GO-TERM | *** Assignment: GO-TERM | ||
| − | |||
| − | |||
* Gene: [[SJ21390]] | * Gene: [[SJ21390]] | ||
** Source: [[annotation-saccharina_japonica_genome]] | ** Source: [[annotation-saccharina_japonica_genome]] | ||
| Line 35: | Line 34: | ||
*** Assignment: EC-NUMBER | *** Assignment: EC-NUMBER | ||
** Source: [[orthology-ectocarpus_siliculosus]] | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
| − | * Gene: [[ | + | * Gene: [[SJ03913]] |
** Source: [[annotation-saccharina_japonica_genome]] | ** Source: [[annotation-saccharina_japonica_genome]] | ||
| − | *** Assignment: | + | *** Assignment: EC-NUMBER |
| + | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
== Pathways == | == Pathways == | ||
* [[PWY-6435]], 4-hydroxybenzoate biosynthesis V: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6435 PWY-6435] | * [[PWY-6435]], 4-hydroxybenzoate biosynthesis V: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6435 PWY-6435] | ||
| Line 52: | Line 52: | ||
== External links == | == External links == | ||
{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
| − | |||
| − | |||
{{#set: ec number=EC-4.2.1.17}} | {{#set: ec number=EC-4.2.1.17}} | ||
| − | {{#set: gene associated= | + | {{#set: common name=enoyl-CoA hydratase}} |
| + | {{#set: common name=4-coumaroyl-CoA hydratase}} | ||
| + | {{#set: gene associated=SJ10275|SJ03584|SJ14591|SJ21390|SJ07211|SJ03913}} | ||
{{#set: in pathway=PWY-6435|PWY-7046}} | {{#set: in pathway=PWY-6435|PWY-7046}} | ||
{{#set: reconstruction category=orthology|annotation}} | {{#set: reconstruction category=orthology|annotation}} | ||
| − | {{#set: reconstruction source= | + | {{#set: reconstruction source=annotation-saccharina_japonica_genome|orthology-ectocarpus_siliculosus}} |
{{#set: reconstruction tool=pantograph|pathwaytools}} | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
Latest revision as of 11:45, 10 January 2019
Contents
Reaction RXN-11244
- direction:
- LEFT-TO-RIGHT
- ec number:
- common name:
- enoyl-CoA hydratase
- 4-coumaroyl-CoA hydratase
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 P-COUMAROYL-COA[c] + 1 WATER[c] => 1 CPD-12199[c]
- With common name(s):
- 1 4-coumaroyl-CoA[c] + 1 H2O[c] => 1 3S-(4-hydroxyphenyl)-3-hydroxy-propanoyl-CoA[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: SJ10275
- Source: orthology-ectocarpus_siliculosus
- Gene: SJ03584
- Source: annotation-saccharina_japonica_genome
- Assignment: GO-TERM
- Source: annotation-saccharina_japonica_genome
- Gene: SJ14591
- Source: annotation-saccharina_japonica_genome
- Assignment: GO-TERM
- Source: annotation-saccharina_japonica_genome
- Gene: SJ21390
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: orthology-ectocarpus_siliculosus
- Source: annotation-saccharina_japonica_genome
- Gene: SJ07211
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: orthology-ectocarpus_siliculosus
- Source: annotation-saccharina_japonica_genome
- Gene: SJ03913
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: orthology-ectocarpus_siliculosus
- Source: annotation-saccharina_japonica_genome
Pathways
- PWY-6435, 4-hydroxybenzoate biosynthesis V: PWY-6435
- 4 reactions found over 5 reactions in the full pathway
- PWY-7046, 4-coumarate degradation (anaerobic): PWY-7046
- 2 reactions found over 6 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-ectocarpus_siliculosus
- Tool: pantograph
- Source: orthology-ectocarpus_siliculosus
- Category: annotation
- Source: annotation-saccharina_japonica_genome
- Tool: pathwaytools
- Source: annotation-saccharina_japonica_genome
