Difference between revisions of "RXN-10841"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10841 RXN-10841] == * direction: ** REVERSIBLE * common name: ** all-trans-retinol dehydrogenas...") |
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| Line 3: | Line 3: | ||
* direction: | * direction: | ||
** REVERSIBLE | ** REVERSIBLE | ||
| − | |||
| − | |||
* ec number: | * ec number: | ||
** [http://enzyme.expasy.org/EC/1.1.1.300 EC-1.1.1.300] | ** [http://enzyme.expasy.org/EC/1.1.1.300 EC-1.1.1.300] | ||
| + | * common name: | ||
| + | ** all-trans-retinol dehydrogenase | ||
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
| − | ** 1 [[ | + | ** 1 [[CPD-13524]][c] '''+''' 1 [[NADP]][c] '''<=>''' 1 [[RETINAL]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] |
* With common name(s): | * With common name(s): | ||
| − | ** 1 | + | ** 1 all-trans-retinol[c] '''+''' 1 NADP+[c] '''<=>''' 1 all-trans-retinal[c] '''+''' 1 NADPH[c] '''+''' 1 H+[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Genes have been associated with this reaction based on different elements listed below. | Genes have been associated with this reaction based on different elements listed below. | ||
| − | |||
| − | |||
| − | |||
* Gene: [[SJ13034]] | * Gene: [[SJ13034]] | ||
** Source: [[annotation-saccharina_japonica_genome]] | ** Source: [[annotation-saccharina_japonica_genome]] | ||
*** Assignment: EC-NUMBER | *** Assignment: EC-NUMBER | ||
| − | * Gene: [[ | + | * Gene: [[SJ12574]] |
** Source: [[annotation-saccharina_japonica_genome]] | ** Source: [[annotation-saccharina_japonica_genome]] | ||
*** Assignment: EC-NUMBER | *** Assignment: EC-NUMBER | ||
* Gene: [[SJ19151]] | * Gene: [[SJ19151]] | ||
| + | ** Source: [[annotation-saccharina_japonica_genome]] | ||
| + | *** Assignment: EC-NUMBER | ||
| + | * Gene: [[SJ02723]] | ||
** Source: [[annotation-saccharina_japonica_genome]] | ** Source: [[annotation-saccharina_japonica_genome]] | ||
*** Assignment: EC-NUMBER | *** Assignment: EC-NUMBER | ||
| Line 40: | Line 40: | ||
== External links == | == External links == | ||
* RHEA: | * RHEA: | ||
| − | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id= | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25036 25036] |
* LIGAND-RXN: | * LIGAND-RXN: | ||
** [http://www.genome.jp/dbget-bin/www_bget?R08379 R08379] | ** [http://www.genome.jp/dbget-bin/www_bget?R08379 R08379] | ||
{{#set: direction=REVERSIBLE}} | {{#set: direction=REVERSIBLE}} | ||
| − | |||
{{#set: ec number=EC-1.1.1.300}} | {{#set: ec number=EC-1.1.1.300}} | ||
| − | {{#set: gene associated= | + | {{#set: common name=all-trans-retinol dehydrogenase}} |
| + | {{#set: gene associated=SJ13034|SJ12574|SJ19151|SJ02723}} | ||
{{#set: in pathway=PWY-6861|PWY-6857}} | {{#set: in pathway=PWY-6861|PWY-6857}} | ||
{{#set: reconstruction category=annotation}} | {{#set: reconstruction category=annotation}} | ||
{{#set: reconstruction source=annotation-saccharina_japonica_genome}} | {{#set: reconstruction source=annotation-saccharina_japonica_genome}} | ||
{{#set: reconstruction tool=pathwaytools}} | {{#set: reconstruction tool=pathwaytools}} | ||
Latest revision as of 13:00, 10 January 2019
Contents
Reaction RXN-10841
- direction:
- REVERSIBLE
- ec number:
- common name:
- all-trans-retinol dehydrogenase
- Synonym(s):
Reaction Formula
- With identifiers:
- With common name(s):
- 1 all-trans-retinol[c] + 1 NADP+[c] <=> 1 all-trans-retinal[c] + 1 NADPH[c] + 1 H+[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: SJ13034
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: annotation-saccharina_japonica_genome
- Gene: SJ12574
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: annotation-saccharina_japonica_genome
- Gene: SJ19151
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: annotation-saccharina_japonica_genome
- Gene: SJ02723
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: annotation-saccharina_japonica_genome
Pathways
- PWY-6861, the visual cycle I (vertebrates): PWY-6861
- 1 reactions found over 12 reactions in the full pathway
- PWY-6857, retinol biosynthesis: PWY-6857
- 3 reactions found over 7 reactions in the full pathway
Reconstruction information
- Category: annotation
- Source: annotation-saccharina_japonica_genome
- Tool: pathwaytools
- Source: annotation-saccharina_japonica_genome
External links
