Difference between revisions of "RXN-14273"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14273 RXN-14273] == * direction: ** LEFT-TO-RIGHT * common name: ** trans-tetradec-2-enoyl-CoA...") |
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Line 3: | Line 3: | ||
* direction: | * direction: | ||
** LEFT-TO-RIGHT | ** LEFT-TO-RIGHT | ||
+ | * ec number: | ||
+ | ** [http://enzyme.expasy.org/EC/4.2.1.17 EC-4.2.1.17] | ||
* common name: | * common name: | ||
** trans-tetradec-2-enoyl-CoA hydratase | ** trans-tetradec-2-enoyl-CoA hydratase | ||
** enoyl-CoA hydratase | ** enoyl-CoA hydratase | ||
− | |||
− | |||
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
− | ** 1 [[ | + | ** 1 [[CPD-15568]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CPD0-2171]][c] |
* With common name(s): | * With common name(s): | ||
− | ** 1 | + | ** 1 2E)-tetradec-2-enoyl-CoA[c] '''+''' 1 H2O[c] '''=>''' 1 (S)-3-hydroxytetradecanoyl-CoA[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Genes have been associated with this reaction based on different elements listed below. | Genes have been associated with this reaction based on different elements listed below. | ||
− | * Gene: [[ | + | * Gene: [[SJ00040]] |
+ | ** Source: [[orthology-nannochloropsis_salina]] | ||
+ | * Gene: [[SJ07211]] | ||
** Source: [[annotation-saccharina_japonica_genome]] | ** Source: [[annotation-saccharina_japonica_genome]] | ||
*** Assignment: EC-NUMBER | *** Assignment: EC-NUMBER | ||
− | |||
− | |||
− | |||
− | |||
− | |||
** Source: [[orthology-ectocarpus_siliculosus]] | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
* Gene: [[SJ03584]] | * Gene: [[SJ03584]] | ||
Line 31: | Line 28: | ||
*** Assignment: GO-TERM | *** Assignment: GO-TERM | ||
** Source: [[orthology-nannochloropsis_salina]] | ** Source: [[orthology-nannochloropsis_salina]] | ||
+ | * Gene: [[SJ14591]] | ||
+ | ** Source: [[annotation-saccharina_japonica_genome]] | ||
+ | *** Assignment: GO-TERM | ||
* Gene: [[SJ21390]] | * Gene: [[SJ21390]] | ||
** Source: [[annotation-saccharina_japonica_genome]] | ** Source: [[annotation-saccharina_japonica_genome]] | ||
*** Assignment: EC-NUMBER | *** Assignment: EC-NUMBER | ||
** Source: [[orthology-ectocarpus_siliculosus]] | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
− | * Gene: [[ | + | * Gene: [[SJ03913]] |
− | + | ||
− | + | ||
** Source: [[annotation-saccharina_japonica_genome]] | ** Source: [[annotation-saccharina_japonica_genome]] | ||
*** Assignment: EC-NUMBER | *** Assignment: EC-NUMBER | ||
+ | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
+ | * Gene: [[SJ10275]] | ||
** Source: [[orthology-ectocarpus_siliculosus]] | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
== Pathways == | == Pathways == | ||
* [[PWY-7654]], (8E,10E)-dodeca-8,10-dienol biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7654 PWY-7654] | * [[PWY-7654]], (8E,10E)-dodeca-8,10-dienol biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7654 PWY-7654] | ||
− | ** ''' | + | ** '''5''' reactions found over '''11''' reactions in the full pathway |
== Reconstruction information == | == Reconstruction information == | ||
* Category: [[orthology]] | * Category: [[orthology]] | ||
− | |||
− | |||
** Source: [[orthology-nannochloropsis_salina]] | ** Source: [[orthology-nannochloropsis_salina]] | ||
+ | *** Tool: [[pantograph]] | ||
+ | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
*** Tool: [[pantograph]] | *** Tool: [[pantograph]] | ||
* Category: [[annotation]] | * Category: [[annotation]] | ||
Line 59: | Line 59: | ||
** [http://www.genome.jp/dbget-bin/www_bget?R04740 R04740] | ** [http://www.genome.jp/dbget-bin/www_bget?R04740 R04740] | ||
{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
+ | {{#set: ec number=EC-4.2.1.17}} | ||
{{#set: common name=trans-tetradec-2-enoyl-CoA hydratase}} | {{#set: common name=trans-tetradec-2-enoyl-CoA hydratase}} | ||
{{#set: common name=enoyl-CoA hydratase}} | {{#set: common name=enoyl-CoA hydratase}} | ||
− | + | {{#set: gene associated=SJ00040|SJ07211|SJ03584|SJ14591|SJ21390|SJ03913|SJ10275}} | |
− | {{#set: gene associated= | + | |
{{#set: in pathway=PWY-7654}} | {{#set: in pathway=PWY-7654}} | ||
{{#set: reconstruction category=orthology|annotation}} | {{#set: reconstruction category=orthology|annotation}} | ||
− | {{#set: reconstruction source= | + | {{#set: reconstruction source=annotation-saccharina_japonica_genome|orthology-nannochloropsis_salina|orthology-ectocarpus_siliculosus}} |
{{#set: reconstruction tool=pantograph|pathwaytools}} | {{#set: reconstruction tool=pantograph|pathwaytools}} |
Latest revision as of 12:10, 10 January 2019
Contents
Reaction RXN-14273
- direction:
- LEFT-TO-RIGHT
- ec number:
- common name:
- trans-tetradec-2-enoyl-CoA hydratase
- enoyl-CoA hydratase
- Synonym(s):
Reaction Formula
- With identifiers:
- With common name(s):
- 1 2E)-tetradec-2-enoyl-CoA[c] + 1 H2O[c] => 1 (S)-3-hydroxytetradecanoyl-CoA[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: SJ00040
- Source: orthology-nannochloropsis_salina
- Gene: SJ07211
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: orthology-ectocarpus_siliculosus
- Source: annotation-saccharina_japonica_genome
- Gene: SJ03584
- Source: annotation-saccharina_japonica_genome
- Assignment: GO-TERM
- Source: orthology-nannochloropsis_salina
- Source: annotation-saccharina_japonica_genome
- Gene: SJ14591
- Source: annotation-saccharina_japonica_genome
- Assignment: GO-TERM
- Source: annotation-saccharina_japonica_genome
- Gene: SJ21390
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: orthology-ectocarpus_siliculosus
- Source: annotation-saccharina_japonica_genome
- Gene: SJ03913
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: orthology-ectocarpus_siliculosus
- Source: annotation-saccharina_japonica_genome
- Gene: SJ10275
- Source: orthology-ectocarpus_siliculosus
Pathways
- PWY-7654, (8E,10E)-dodeca-8,10-dienol biosynthesis: PWY-7654
- 5 reactions found over 11 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-nannochloropsis_salina
- Tool: pantograph
- Source: orthology-ectocarpus_siliculosus
- Tool: pantograph
- Source: orthology-nannochloropsis_salina
- Category: annotation
- Source: annotation-saccharina_japonica_genome
- Tool: pathwaytools
- Source: annotation-saccharina_japonica_genome
External links