Difference between revisions of "RXN-16821"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16821 RXN-16821] == * direction: ** REVERSIBLE * common name: ** tRNA-5-taurinomethyluridine 2-...") |
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16821 RXN-16821] == | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16821 RXN-16821] == | ||
* direction: | * direction: | ||
| − | ** | + | ** LEFT-TO-RIGHT |
| − | + | ||
| − | + | ||
* ec number: | * ec number: | ||
** [http://enzyme.expasy.org/EC/2.8.1.14 EC-2.8.1.14] | ** [http://enzyme.expasy.org/EC/2.8.1.14 EC-2.8.1.14] | ||
| + | * common name: | ||
| + | ** tRNA-5-taurinomethyluridine 2-sulfurtransferase | ||
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
| − | ** 1 [[ | + | ** 1 [[TUM1-S-sulfanylcysteine]][c] '''+''' 1 [[tRNA-containing-5-taurinomethyluridine]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[Donor-H2]][c] '''=>''' 1 [[tRNA-with-5-taurinomethyl-2-thiouridine]][c] '''+''' 1 [[TUM1-L-cysteine]][c] '''+''' 1 [[AMP]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[Acceptor]][c] '''+''' 1 [[PROTON]][c] |
* With common name(s): | * With common name(s): | ||
| − | ** 1 a [ | + | ** 1 a [3-mercaptopyruvate sulfurtransferase]-S-sulfanyl-L-cysteine[c] '''+''' 1 a 5-taurinomethyluridine in tRNA[c] '''+''' 1 ATP[c] '''+''' 1 a reduced electron acceptor[c] '''=>''' 1 a 5-taurinomethyl-2-thiouridine in tRNA[c] '''+''' 1 a [3-mercaptopyruvate sulfurtransferase]-L-cysteine[c] '''+''' 1 AMP[c] '''+''' 1 diphosphate[c] '''+''' 1 an oxidized electron acceptor[c] '''+''' 1 H+[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Genes have been associated with this reaction based on different elements listed below. | Genes have been associated with this reaction based on different elements listed below. | ||
| − | * Gene: [[ | + | * Gene: [[SJ13939]] |
** Source: [[annotation-saccharina_japonica_genome]] | ** Source: [[annotation-saccharina_japonica_genome]] | ||
*** Assignment: EC-NUMBER | *** Assignment: EC-NUMBER | ||
| − | * Gene: [[ | + | * Gene: [[SJ00619]] |
** Source: [[annotation-saccharina_japonica_genome]] | ** Source: [[annotation-saccharina_japonica_genome]] | ||
*** Assignment: EC-NUMBER | *** Assignment: EC-NUMBER | ||
== Pathways == | == Pathways == | ||
| + | * [[PWY-7889]], tRNA-uridine 2-thiolation (mammalian mitochondria): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7889 PWY-7889] | ||
| + | ** '''2''' reactions found over '''4''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
* Category: [[annotation]] | * Category: [[annotation]] | ||
| Line 29: | Line 31: | ||
*** Tool: [[pathwaytools]] | *** Tool: [[pathwaytools]] | ||
== External links == | == External links == | ||
| − | {{#set: direction= | + | {{#set: direction=LEFT-TO-RIGHT}} |
| − | + | ||
{{#set: ec number=EC-2.8.1.14}} | {{#set: ec number=EC-2.8.1.14}} | ||
| − | {{#set: gene associated= | + | {{#set: common name=tRNA-5-taurinomethyluridine 2-sulfurtransferase}} |
| − | {{#set: in pathway=}} | + | {{#set: gene associated=SJ13939|SJ00619}} |
| + | {{#set: in pathway=PWY-7889}} | ||
{{#set: reconstruction category=annotation}} | {{#set: reconstruction category=annotation}} | ||
{{#set: reconstruction source=annotation-saccharina_japonica_genome}} | {{#set: reconstruction source=annotation-saccharina_japonica_genome}} | ||
{{#set: reconstruction tool=pathwaytools}} | {{#set: reconstruction tool=pathwaytools}} | ||
Latest revision as of 12:28, 10 January 2019
Contents
Reaction RXN-16821
- direction:
- LEFT-TO-RIGHT
- ec number:
- common name:
- tRNA-5-taurinomethyluridine 2-sulfurtransferase
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 TUM1-S-sulfanylcysteine[c] + 1 tRNA-containing-5-taurinomethyluridine[c] + 1 ATP[c] + 1 Donor-H2[c] => 1 tRNA-with-5-taurinomethyl-2-thiouridine[c] + 1 TUM1-L-cysteine[c] + 1 AMP[c] + 1 PPI[c] + 1 Acceptor[c] + 1 PROTON[c]
- With common name(s):
- 1 a [3-mercaptopyruvate sulfurtransferase]-S-sulfanyl-L-cysteine[c] + 1 a 5-taurinomethyluridine in tRNA[c] + 1 ATP[c] + 1 a reduced electron acceptor[c] => 1 a 5-taurinomethyl-2-thiouridine in tRNA[c] + 1 a [3-mercaptopyruvate sulfurtransferase]-L-cysteine[c] + 1 AMP[c] + 1 diphosphate[c] + 1 an oxidized electron acceptor[c] + 1 H+[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: SJ13939
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: annotation-saccharina_japonica_genome
- Gene: SJ00619
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: annotation-saccharina_japonica_genome
Pathways
- PWY-7889, tRNA-uridine 2-thiolation (mammalian mitochondria): PWY-7889
- 2 reactions found over 4 reactions in the full pathway
Reconstruction information
- Category: annotation
- Source: annotation-saccharina_japonica_genome
- Tool: pathwaytools
- Source: annotation-saccharina_japonica_genome
