Difference between revisions of "P122-PWY"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=P122-PWY P122-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1239 TAX-12...")
 
 
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** glucose fermentation to lactate
 
** glucose fermentation to lactate
 
** phosphoketolase pathway
 
** phosphoketolase pathway
 +
** lactic acid heterofermentation
 +
** glucose fermentation to lactic acid
  
 
== Reaction(s) found ==
 
== Reaction(s) found ==
Line 14: Line 16:
 
* [[2PGADEHYDRAT-RXN]]
 
* [[2PGADEHYDRAT-RXN]]
 
** 3 associated gene(s):
 
** 3 associated gene(s):
−
*** [[SJ13450]]
 
 
*** [[SJ08386]]
 
*** [[SJ08386]]
 
*** [[SJ17529]]
 
*** [[SJ17529]]
 +
*** [[SJ13450]]
 
** 4 reconstruction source(s) associated:
 
** 4 reconstruction source(s) associated:
 
*** [[orthology-arabidopsis_thaliana]]
 
*** [[orthology-arabidopsis_thaliana]]
 +
*** [[annotation-saccharina_japonica_genome]]
 +
*** [[orthology-nannochloropsis_salina]]
 
*** [[orthology-ectocarpus_siliculosus]]
 
*** [[orthology-ectocarpus_siliculosus]]
−
*** [[orthology-nannochloropsis_salina]]
 
−
*** [[annotation-saccharina_japonica_genome]]
 
 
* [[6PGLUCONDEHYDROG-RXN]]
 
* [[6PGLUCONDEHYDROG-RXN]]
 
** 11 associated gene(s):
 
** 11 associated gene(s):
−
*** [[SJ12699]]
+
*** [[SJ06127]]
−
*** [[SJ11815]]
+
*** [[SJ11912]]
 
*** [[SJ12698]]
 
*** [[SJ12698]]
−
*** [[SJ07211]]
+
*** [[SJ22264]]
−
*** [[SJ11912]]
+
−
*** [[SJ00878]]
+
 
*** [[SJ16180]]
 
*** [[SJ16180]]
−
*** [[SJ06127]]
 
 
*** [[SJ15062]]
 
*** [[SJ15062]]
 +
*** [[SJ11815]]
 
*** [[SJ14331]]
 
*** [[SJ14331]]
−
*** [[SJ22264]]
+
*** [[SJ07211]]
 +
*** [[SJ12699]]
 +
*** [[SJ00878]]
 
** 4 reconstruction source(s) associated:
 
** 4 reconstruction source(s) associated:
 
*** [[orthology-arabidopsis_thaliana]]
 
*** [[orthology-arabidopsis_thaliana]]
−
*** [[orthology-ectocarpus_siliculosus]]
 
−
*** [[orthology-nannochloropsis_salina]]
 
 
*** [[annotation-saccharina_japonica_genome]]
 
*** [[annotation-saccharina_japonica_genome]]
 +
*** [[orthology-nannochloropsis_salina]]
 +
*** [[orthology-ectocarpus_siliculosus]]
 
* [[6PGLUCONOLACT-RXN]]
 
* [[6PGLUCONOLACT-RXN]]
 
** 2 associated gene(s):
 
** 2 associated gene(s):
−
*** [[SJ10585]]
 
 
*** [[SJ07027]]
 
*** [[SJ07027]]
 +
*** [[SJ10585]]
 
** 4 reconstruction source(s) associated:
 
** 4 reconstruction source(s) associated:
 
*** [[orthology-arabidopsis_thaliana]]
 
*** [[orthology-arabidopsis_thaliana]]
−
*** [[orthology-ectocarpus_siliculosus]]
 
−
*** [[orthology-nannochloropsis_salina]]
 
 
*** [[annotation-saccharina_japonica_genome]]
 
*** [[annotation-saccharina_japonica_genome]]
 +
*** [[orthology-nannochloropsis_salina]]
 +
*** [[orthology-ectocarpus_siliculosus]]
 
* [[ALCOHOL-DEHYDROG-RXN]]
 
* [[ALCOHOL-DEHYDROG-RXN]]
 
** 3 associated gene(s):
 
** 3 associated gene(s):
−
*** [[SJ21601]]
 
 
*** [[SJ07759]]
 
*** [[SJ07759]]
 +
*** [[SJ21601]]
 
*** [[SJ14768]]
 
*** [[SJ14768]]
 
** 1 reconstruction source(s) associated:
 
** 1 reconstruction source(s) associated:
Line 58: Line 60:
 
* [[DLACTDEHYDROGNAD-RXN]]
 
* [[DLACTDEHYDROGNAD-RXN]]
 
** 2 associated gene(s):
 
** 2 associated gene(s):
−
*** [[SJ20245]]
 
 
*** [[SJ21294]]
 
*** [[SJ21294]]
 +
*** [[SJ20245]]
 
** 2 reconstruction source(s) associated:
 
** 2 reconstruction source(s) associated:
 
*** [[orthology-nannochloropsis_salina]]
 
*** [[orthology-nannochloropsis_salina]]
Line 72: Line 74:
 
* [[GAPOXNPHOSPHN-RXN]]
 
* [[GAPOXNPHOSPHN-RXN]]
 
** 5 associated gene(s):
 
** 5 associated gene(s):
 +
*** [[SJ05204]]
 +
*** [[SJ07665]]
 
*** [[SJ00348]]
 
*** [[SJ00348]]
 
*** [[SJ05251]]
 
*** [[SJ05251]]
−
*** [[SJ05204]]
 
 
*** [[SJ14154]]
 
*** [[SJ14154]]
−
*** [[SJ07665]]
 
 
** 4 reconstruction source(s) associated:
 
** 4 reconstruction source(s) associated:
 
*** [[orthology-arabidopsis_thaliana]]
 
*** [[orthology-arabidopsis_thaliana]]
−
*** [[orthology-ectocarpus_siliculosus]]
 
−
*** [[orthology-nannochloropsis_salina]]
 
 
*** [[annotation-saccharina_japonica_genome]]
 
*** [[annotation-saccharina_japonica_genome]]
 +
*** [[orthology-nannochloropsis_salina]]
 +
*** [[orthology-ectocarpus_siliculosus]]
 
* [[GLU6PDEHYDROG-RXN]]
 
* [[GLU6PDEHYDROG-RXN]]
 
** 1 associated gene(s):
 
** 1 associated gene(s):
 
*** [[SJ11913]]
 
*** [[SJ11913]]
 
** 2 reconstruction source(s) associated:
 
** 2 reconstruction source(s) associated:
 +
*** [[annotation-saccharina_japonica_genome]]
 
*** [[orthology-ectocarpus_siliculosus]]
 
*** [[orthology-ectocarpus_siliculosus]]
−
*** [[annotation-saccharina_japonica_genome]]
 
 
* [[GLUCOKIN-RXN]]
 
* [[GLUCOKIN-RXN]]
 
** 3 associated gene(s):
 
** 3 associated gene(s):
−
*** [[SJ19906]]
 
 
*** [[SJ04919]]
 
*** [[SJ04919]]
 
*** [[SJ12224]]
 
*** [[SJ12224]]
 +
*** [[SJ19906]]
 
** 2 reconstruction source(s) associated:
 
** 2 reconstruction source(s) associated:
 +
*** [[annotation-saccharina_japonica_genome]]
 
*** [[orthology-ectocarpus_siliculosus]]
 
*** [[orthology-ectocarpus_siliculosus]]
−
*** [[annotation-saccharina_japonica_genome]]
 
 
* [[L-LACTATE-DEHYDROGENASE-RXN]]
 
* [[L-LACTATE-DEHYDROGENASE-RXN]]
 
** 1 associated gene(s):
 
** 1 associated gene(s):
 
*** [[SJ03192]]
 
*** [[SJ03192]]
−
** 2 reconstruction source(s) associated:
+
** 1 reconstruction source(s) associated:
 
*** [[orthology-ectocarpus_siliculosus]]
 
*** [[orthology-ectocarpus_siliculosus]]
−
*** [[annotation-saccharina_japonica_genome]]
 
 
* [[PEPDEPHOS-RXN]]
 
* [[PEPDEPHOS-RXN]]
 
** 4 associated gene(s):
 
** 4 associated gene(s):
−
*** [[SJ18192]]
 
 
*** [[SJ18193]]
 
*** [[SJ18193]]
−
*** [[SJ13451]]
 
 
*** [[SJ17585]]
 
*** [[SJ17585]]
 +
*** [[SJ18192]]
 +
*** [[SJ13451]]
 
** 4 reconstruction source(s) associated:
 
** 4 reconstruction source(s) associated:
 
*** [[orthology-arabidopsis_thaliana]]
 
*** [[orthology-arabidopsis_thaliana]]
−
*** [[orthology-ectocarpus_siliculosus]]
 
−
*** [[orthology-nannochloropsis_salina]]
 
 
*** [[annotation-saccharina_japonica_genome]]
 
*** [[annotation-saccharina_japonica_genome]]
 +
*** [[orthology-nannochloropsis_salina]]
 +
*** [[orthology-ectocarpus_siliculosus]]
 
* [[PGLUCISOM-RXN]]
 
* [[PGLUCISOM-RXN]]
 
** 2 associated gene(s):
 
** 2 associated gene(s):
Line 118: Line 119:
 
*** [[SJ08179]]
 
*** [[SJ08179]]
 
** 2 reconstruction source(s) associated:
 
** 2 reconstruction source(s) associated:
−
*** [[orthology-ectocarpus_siliculosus]]
 
 
*** [[annotation-saccharina_japonica_genome]]
 
*** [[annotation-saccharina_japonica_genome]]
 +
*** [[orthology-ectocarpus_siliculosus]]
 
* [[PHOSACETYLTRANS-RXN]]
 
* [[PHOSACETYLTRANS-RXN]]
 
** 2 associated gene(s):
 
** 2 associated gene(s):
Line 128: Line 129:
 
* [[PHOSGLYPHOS-RXN]]
 
* [[PHOSGLYPHOS-RXN]]
 
** 6 associated gene(s):
 
** 6 associated gene(s):
−
*** [[SJ10780]]
 
−
*** [[SJ18020]]
 
−
*** [[SJ05024]]
 
 
*** [[SJ15992]]
 
*** [[SJ15992]]
−
*** [[SJ15971]]
+
*** [[SJ05024]]
 
*** [[SJ15991]]
 
*** [[SJ15991]]
 +
*** [[SJ18020]]
 +
*** [[SJ15971]]
 +
*** [[SJ10780]]
 
** 4 reconstruction source(s) associated:
 
** 4 reconstruction source(s) associated:
 
*** [[orthology-arabidopsis_thaliana]]
 
*** [[orthology-arabidopsis_thaliana]]
 +
*** [[annotation-saccharina_japonica_genome]]
 +
*** [[orthology-nannochloropsis_salina]]
 
*** [[orthology-ectocarpus_siliculosus]]
 
*** [[orthology-ectocarpus_siliculosus]]
−
*** [[orthology-nannochloropsis_salina]]
 
−
*** [[annotation-saccharina_japonica_genome]]
 
 
* [[RIBULP3EPIM-RXN]]
 
* [[RIBULP3EPIM-RXN]]
 
** 2 associated gene(s):
 
** 2 associated gene(s):
Line 145: Line 146:
 
** 4 reconstruction source(s) associated:
 
** 4 reconstruction source(s) associated:
 
*** [[orthology-arabidopsis_thaliana]]
 
*** [[orthology-arabidopsis_thaliana]]
 +
*** [[annotation-saccharina_japonica_genome]]
 +
*** [[orthology-nannochloropsis_salina]]
 
*** [[orthology-ectocarpus_siliculosus]]
 
*** [[orthology-ectocarpus_siliculosus]]
−
*** [[orthology-nannochloropsis_salina]]
 
−
*** [[annotation-saccharina_japonica_genome]]
 
 
* [[RXN-15513]]
 
* [[RXN-15513]]
 
** 6 associated gene(s):
 
** 6 associated gene(s):
 
*** [[SJ13678]]
 
*** [[SJ13678]]
 
*** [[SJ14916]]
 
*** [[SJ14916]]
 +
*** [[SJ21685]]
 +
*** [[SJ09590]]
 
*** [[SJ12497]]
 
*** [[SJ12497]]
 
*** [[SJ15529]]
 
*** [[SJ15529]]
−
*** [[SJ21685]]
 
−
*** [[SJ09590]]
 
 
** 1 reconstruction source(s) associated:
 
** 1 reconstruction source(s) associated:
 
*** [[annotation-saccharina_japonica_genome]]
 
*** [[annotation-saccharina_japonica_genome]]
Line 164: Line 165:
 
{{#set: taxonomic range=TAX-1239}}
 
{{#set: taxonomic range=TAX-1239}}
 
{{#set: common name=heterolactic fermentation}}
 
{{#set: common name=heterolactic fermentation}}
−
{{#set: common name=lactate heterofermentation|glucose fermentation to lactate|phosphoketolase pathway}}
+
{{#set: common name=lactate heterofermentation|glucose fermentation to lactate|phosphoketolase pathway|lactic acid heterofermentation|glucose fermentation to lactic acid}}
 
{{#set: reaction found=16}}
 
{{#set: reaction found=16}}
 
{{#set: total reaction=18}}
 
{{#set: total reaction=18}}
 
{{#set: completion rate=89.0}}
 
{{#set: completion rate=89.0}}

Latest revision as of 13:32, 10 January 2019

Pathway P122-PWY

  • taxonomic range:
  • common name:
    • heterolactic fermentation
  • Synonym(s):
    • lactate heterofermentation
    • glucose fermentation to lactate
    • phosphoketolase pathway
    • lactic acid heterofermentation
    • glucose fermentation to lactic acid

Reaction(s) found

16 reactions found over 18 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/sjapgem/index.php?title=P122-PWY&oldid=17293"