Difference between revisions of "RXN-2562"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-2562 RXN-2562] == * direction: ** LEFT-TO-RIGHT * common name: ** δ-tocopherol methyltran...") |
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* direction: | * direction: | ||
** LEFT-TO-RIGHT | ** LEFT-TO-RIGHT | ||
| − | |||
| − | |||
* ec number: | * ec number: | ||
** [http://enzyme.expasy.org/EC/2.1.1.95 EC-2.1.1.95] | ** [http://enzyme.expasy.org/EC/2.1.1.95 EC-2.1.1.95] | ||
| + | * common name: | ||
| + | ** δ-tocopherol methyltransferase | ||
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
| − | ** 1 [[ | + | ** 1 [[S-ADENOSYLMETHIONINE]][c] '''+''' 1 [[DELTA-TOCOPHEROL]][c] '''=>''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[BETA-TOCOPHEROL]][c] '''+''' 1 [[PROTON]][c] |
* With common name(s): | * With common name(s): | ||
| − | ** | + | ** 1 S-adenosyl-L-methionine[c] '''+''' 1 δ-tocopherol[c] '''=>''' 1 S-adenosyl-L-homocysteine[c] '''+''' 1 β-tocopherol[c] '''+''' 1 H+[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
| Line 20: | Line 20: | ||
** Source: [[annotation-saccharina_japonica_genome]] | ** Source: [[annotation-saccharina_japonica_genome]] | ||
*** Assignment: EC-NUMBER | *** Assignment: EC-NUMBER | ||
| − | |||
** Source: [[orthology-nannochloropsis_salina]] | ** Source: [[orthology-nannochloropsis_salina]] | ||
** Source: [[orthology-arabidopsis_thaliana]] | ** Source: [[orthology-arabidopsis_thaliana]] | ||
| + | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
== Pathways == | == Pathways == | ||
* [[PWY-1422]], vitamin E biosynthesis (tocopherols): [http://metacyc.org/META/NEW-IMAGE?object=PWY-1422 PWY-1422] | * [[PWY-1422]], vitamin E biosynthesis (tocopherols): [http://metacyc.org/META/NEW-IMAGE?object=PWY-1422 PWY-1422] | ||
| − | ** ''' | + | ** '''5''' reactions found over '''7''' reactions in the full pathway |
== Reconstruction information == | == Reconstruction information == | ||
* Category: [[orthology]] | * Category: [[orthology]] | ||
** Source: [[orthology-arabidopsis_thaliana]] | ** Source: [[orthology-arabidopsis_thaliana]] | ||
| − | |||
| − | |||
*** Tool: [[pantograph]] | *** Tool: [[pantograph]] | ||
** Source: [[orthology-nannochloropsis_salina]] | ** Source: [[orthology-nannochloropsis_salina]] | ||
| + | *** Tool: [[pantograph]] | ||
| + | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
*** Tool: [[pantograph]] | *** Tool: [[pantograph]] | ||
* Category: [[annotation]] | * Category: [[annotation]] | ||
| Line 41: | Line 41: | ||
** [http://www.genome.jp/dbget-bin/www_bget?R07504 R07504] | ** [http://www.genome.jp/dbget-bin/www_bget?R07504 R07504] | ||
{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
| − | |||
{{#set: ec number=EC-2.1.1.95}} | {{#set: ec number=EC-2.1.1.95}} | ||
| + | {{#set: common name=δ-tocopherol methyltransferase}} | ||
{{#set: gene associated=SJ10416}} | {{#set: gene associated=SJ10416}} | ||
{{#set: in pathway=PWY-1422}} | {{#set: in pathway=PWY-1422}} | ||
{{#set: reconstruction category=orthology|annotation}} | {{#set: reconstruction category=orthology|annotation}} | ||
| − | {{#set: reconstruction source=orthology-arabidopsis_thaliana| | + | {{#set: reconstruction source=orthology-arabidopsis_thaliana|annotation-saccharina_japonica_genome|orthology-nannochloropsis_salina|orthology-ectocarpus_siliculosus}} |
{{#set: reconstruction tool=pantograph|pathwaytools}} | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
Latest revision as of 13:32, 10 January 2019
Contents
Reaction RXN-2562
- direction:
- LEFT-TO-RIGHT
- ec number:
- common name:
- δ-tocopherol methyltransferase
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 S-ADENOSYLMETHIONINE[c] + 1 DELTA-TOCOPHEROL[c] => 1 ADENOSYL-HOMO-CYS[c] + 1 BETA-TOCOPHEROL[c] + 1 PROTON[c]
- With common name(s):
- 1 S-adenosyl-L-methionine[c] + 1 δ-tocopherol[c] => 1 S-adenosyl-L-homocysteine[c] + 1 β-tocopherol[c] + 1 H+[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: SJ10416
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: orthology-nannochloropsis_salina
- Source: orthology-arabidopsis_thaliana
- Source: orthology-ectocarpus_siliculosus
- Source: annotation-saccharina_japonica_genome
Pathways
- PWY-1422, vitamin E biosynthesis (tocopherols): PWY-1422
- 5 reactions found over 7 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-arabidopsis_thaliana
- Tool: pantograph
- Source: orthology-nannochloropsis_salina
- Tool: pantograph
- Source: orthology-ectocarpus_siliculosus
- Tool: pantograph
- Source: orthology-arabidopsis_thaliana
- Category: annotation
- Source: annotation-saccharina_japonica_genome
- Tool: pathwaytools
- Source: annotation-saccharina_japonica_genome
External links
- LIGAND-RXN:
