Difference between revisions of "RXN-5286"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-5286 RXN-5286] == * direction: ** LEFT-TO-RIGHT * common name: ** 3,8-divinyl-chlorophyllide 8-...") |
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* direction: | * direction: | ||
** LEFT-TO-RIGHT | ** LEFT-TO-RIGHT | ||
− | |||
− | |||
* ec number: | * ec number: | ||
** [http://enzyme.expasy.org/EC/1.3.1.75 EC-1.3.1.75] | ** [http://enzyme.expasy.org/EC/1.3.1.75 EC-1.3.1.75] | ||
+ | * common name: | ||
+ | ** 3,8-divinyl-chlorophyllide 8-vinyl reductase | ||
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
− | ** 1 [[DIVINYLCHLOROPHYLLIDE-A]][c] '''+''' 1 [[ | + | ** 1 [[DIVINYLCHLOROPHYLLIDE-A]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CHLOROPHYLLIDE-A]][c] '''+''' 1 [[NADP]][c] |
* With common name(s): | * With common name(s): | ||
− | ** 1 3,8-divinyl chlorophyllide a[c] '''+''' 1 | + | ** 1 3,8-divinyl chlorophyllide a[c] '''+''' 1 NADPH[c] '''+''' 1 H+[c] '''=>''' 1 chlorophyllide a[c] '''+''' 1 NADP+[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
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* [[PWY-5526]], bacteriochlorophyll a biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5526 PWY-5526] | * [[PWY-5526]], bacteriochlorophyll a biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5526 PWY-5526] | ||
** '''5''' reactions found over '''13''' reactions in the full pathway | ** '''5''' reactions found over '''13''' reactions in the full pathway | ||
+ | * [[PWY-7760]], bacteriochlorophyll e biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7760 PWY-7760] | ||
+ | ** '''1''' reactions found over '''30''' reactions in the full pathway | ||
* [[PWY-7758]], bacteriochlorophyll d biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7758 PWY-7758] | * [[PWY-7758]], bacteriochlorophyll d biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7758 PWY-7758] | ||
** '''1''' reactions found over '''14''' reactions in the full pathway | ** '''1''' reactions found over '''14''' reactions in the full pathway | ||
* [[PWY-7759]], bacteriochlorophyll c biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7759 PWY-7759] | * [[PWY-7759]], bacteriochlorophyll c biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7759 PWY-7759] | ||
** '''1''' reactions found over '''18''' reactions in the full pathway | ** '''1''' reactions found over '''18''' reactions in the full pathway | ||
− | |||
− | |||
* [[PWY-5086]], chlorophyll a biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5086 PWY-5086] | * [[PWY-5086]], chlorophyll a biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5086 PWY-5086] | ||
** '''2''' reactions found over '''2''' reactions in the full pathway | ** '''2''' reactions found over '''2''' reactions in the full pathway | ||
− | * [[PWY- | + | * [[PWY-5064]], chlorophyll a biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5064 PWY-5064] |
− | ** ''' | + | ** '''5''' reactions found over '''5''' reactions in the full pathway |
== Reconstruction information == | == Reconstruction information == | ||
* Category: [[orthology]] | * Category: [[orthology]] | ||
Line 43: | Line 43: | ||
== External links == | == External links == | ||
* RHEA: | * RHEA: | ||
− | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id= | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14451 14451] |
* LIGAND-RXN: | * LIGAND-RXN: | ||
** [http://www.genome.jp/dbget-bin/www_bget?R06272 R06272] | ** [http://www.genome.jp/dbget-bin/www_bget?R06272 R06272] | ||
{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
− | |||
{{#set: ec number=EC-1.3.1.75}} | {{#set: ec number=EC-1.3.1.75}} | ||
+ | {{#set: common name=3,8-divinyl-chlorophyllide 8-vinyl reductase}} | ||
{{#set: gene associated=SJ12431}} | {{#set: gene associated=SJ12431}} | ||
− | {{#set: in pathway=PWY-5526|PWY- | + | {{#set: in pathway=PWY-5526|PWY-7760|PWY-7758|PWY-7759|PWY-5086|PWY-5064}} |
{{#set: reconstruction category=orthology|annotation}} | {{#set: reconstruction category=orthology|annotation}} | ||
{{#set: reconstruction source=orthology-nannochloropsis_salina|annotation-saccharina_japonica_genome}} | {{#set: reconstruction source=orthology-nannochloropsis_salina|annotation-saccharina_japonica_genome}} | ||
{{#set: reconstruction tool=pantograph|pathwaytools}} | {{#set: reconstruction tool=pantograph|pathwaytools}} |
Latest revision as of 12:33, 10 January 2019
Contents
Reaction RXN-5286
- direction:
- LEFT-TO-RIGHT
- ec number:
- common name:
- 3,8-divinyl-chlorophyllide 8-vinyl reductase
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 DIVINYLCHLOROPHYLLIDE-A[c] + 1 NADPH[c] + 1 PROTON[c] => 1 CHLOROPHYLLIDE-A[c] + 1 NADP[c]
- With common name(s):
- 1 3,8-divinyl chlorophyllide a[c] + 1 NADPH[c] + 1 H+[c] => 1 chlorophyllide a[c] + 1 NADP+[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: SJ12431
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: orthology-nannochloropsis_salina
- Source: annotation-saccharina_japonica_genome
Pathways
- PWY-5526, bacteriochlorophyll a biosynthesis: PWY-5526
- 5 reactions found over 13 reactions in the full pathway
- PWY-7760, bacteriochlorophyll e biosynthesis: PWY-7760
- 1 reactions found over 30 reactions in the full pathway
- PWY-7758, bacteriochlorophyll d biosynthesis: PWY-7758
- 1 reactions found over 14 reactions in the full pathway
- PWY-7759, bacteriochlorophyll c biosynthesis: PWY-7759
- 1 reactions found over 18 reactions in the full pathway
- PWY-5086, chlorophyll a biosynthesis I: PWY-5086
- 2 reactions found over 2 reactions in the full pathway
- PWY-5064, chlorophyll a biosynthesis II: PWY-5064
- 5 reactions found over 5 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-nannochloropsis_salina
- Tool: pantograph
- Source: orthology-nannochloropsis_salina
- Category: annotation
- Source: annotation-saccharina_japonica_genome
- Tool: pathwaytools
- Source: annotation-saccharina_japonica_genome
External links