Difference between revisions of "MANNPISOM-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=MANNPISOM-RXN MANNPISOM-RXN] == * direction: ** REVERSIBLE * common name: ** mannose-6-phosphate is...")
 
 
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* direction:
 
* direction:
 
** REVERSIBLE
 
** REVERSIBLE
−
* common name:
 
−
** mannose-6-phosphate isomerase
 
 
* ec number:
 
* ec number:
 
** [http://enzyme.expasy.org/EC/5.3.1.8 EC-5.3.1.8]
 
** [http://enzyme.expasy.org/EC/5.3.1.8 EC-5.3.1.8]
 +
* common name:
 +
** mannose-6-phosphate isomerase
 
* Synonym(s):
 
* Synonym(s):
  
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== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[SJ15069]]
+
* Gene: [[SJ01610]]
 +
** Source: [[annotation-saccharina_japonica_genome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[SJ15067]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
−
** Source: [[orthology-ectocarpus_siliculosus]]
 
 
** Source: [[orthology-nannochloropsis_salina]]
 
** Source: [[orthology-nannochloropsis_salina]]
 
** Source: [[orthology-arabidopsis_thaliana]]
 
** Source: [[orthology-arabidopsis_thaliana]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 
* Gene: [[SJ22044]]
 
* Gene: [[SJ22044]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
−
** Source: [[orthology-ectocarpus_siliculosus]]
 
 
** Source: [[orthology-nannochloropsis_salina]]
 
** Source: [[orthology-nannochloropsis_salina]]
 
** Source: [[orthology-arabidopsis_thaliana]]
 
** Source: [[orthology-arabidopsis_thaliana]]
−
* Gene: [[SJ15067]]
+
** Source: [[orthology-ectocarpus_siliculosus]]
 +
* Gene: [[SJ15069]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
−
** Source: [[orthology-ectocarpus_siliculosus]]
 
 
** Source: [[orthology-nannochloropsis_salina]]
 
** Source: [[orthology-nannochloropsis_salina]]
 
** Source: [[orthology-arabidopsis_thaliana]]
 
** Source: [[orthology-arabidopsis_thaliana]]
−
* Gene: [[SJ01610]]
+
** Source: [[orthology-ectocarpus_siliculosus]]
−
** Source: [[annotation-saccharina_japonica_genome]]
+
−
*** Assignment: EC-NUMBER
+
 
== Pathways  ==
 
== Pathways  ==
 +
* [[PWY-3861]], mannitol degradation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3861 PWY-3861]
 +
** '''2''' reactions found over '''4''' reactions in the full pathway
 
* [[MANNCAT-PWY]], D-mannose degradation: [http://metacyc.org/META/NEW-IMAGE?object=MANNCAT-PWY MANNCAT-PWY]
 
* [[MANNCAT-PWY]], D-mannose degradation: [http://metacyc.org/META/NEW-IMAGE?object=MANNCAT-PWY MANNCAT-PWY]
 
** '''1''' reactions found over '''1''' reactions in the full pathway
 
** '''1''' reactions found over '''1''' reactions in the full pathway
−
* [[PWY-882]], L-ascorbate biosynthesis I (L-galactose pathway): [http://metacyc.org/META/NEW-IMAGE?object=PWY-882 PWY-882]
+
* [[PWY-5659]], GDP-mannose biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5659 PWY-5659]
−
** '''7''' reactions found over '''8''' reactions in the full pathway
+
** '''3''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-6992]], 1,5-anhydrofructose degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6992 PWY-6992]
 +
** '''4''' reactions found over '''5''' reactions in the full pathway
 
* [[PWY-7456]], β-(1,4)-mannan degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7456 PWY-7456]
 
* [[PWY-7456]], β-(1,4)-mannan degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7456 PWY-7456]
 
** '''2''' reactions found over '''7''' reactions in the full pathway
 
** '''2''' reactions found over '''7''' reactions in the full pathway
 
* [[PWY-3881]], mannitol biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3881 PWY-3881]
 
* [[PWY-3881]], mannitol biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3881 PWY-3881]
 
** '''2''' reactions found over '''3''' reactions in the full pathway
 
** '''2''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY-5659]], GDP-mannose biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5659 PWY-5659]
 
−
** '''4''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-6992]], 1,5-anhydrofructose degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6992 PWY-6992]
 
−
** '''4''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-3861]], mannitol degradation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3861 PWY-3861]
 
−
** '''4''' reactions found over '''4''' reactions in the full pathway
 
 
* [[PWY-7586]], β-1,4-D-mannosyl-N-acetyl-D-glucosamine degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7586 PWY-7586]
 
* [[PWY-7586]], β-1,4-D-mannosyl-N-acetyl-D-glucosamine degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7586 PWY-7586]
 
** '''2''' reactions found over '''3''' reactions in the full pathway
 
** '''2''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-882]], L-ascorbate biosynthesis I (L-galactose pathway): [http://metacyc.org/META/NEW-IMAGE?object=PWY-882 PWY-882]
 +
** '''6''' reactions found over '''8''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
 
** Source: [[orthology-arabidopsis_thaliana]]
 
** Source: [[orthology-arabidopsis_thaliana]]
−
*** Tool: [[pantograph]]
 
−
** Source: [[orthology-ectocarpus_siliculosus]]
 
 
*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
 
** Source: [[orthology-nannochloropsis_salina]]
 
** Source: [[orthology-nannochloropsis_salina]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 
*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
 
* Category: [[annotation]]
 
* Category: [[annotation]]
Line 68: Line 68:
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12356 12356]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12359 12359]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
 
** [http://www.genome.jp/dbget-bin/www_bget?R00772 R00772]
 
** [http://www.genome.jp/dbget-bin/www_bget?R00772 R00772]
Line 84: Line 84:
 
** [http://www.uniprot.org/uniprot/P73377 P73377]
 
** [http://www.uniprot.org/uniprot/P73377 P73377]
 
{{#set: direction=REVERSIBLE}}
 
{{#set: direction=REVERSIBLE}}
−
{{#set: common name=mannose-6-phosphate isomerase}}
 
 
{{#set: ec number=EC-5.3.1.8}}
 
{{#set: ec number=EC-5.3.1.8}}
−
{{#set: gene associated=SJ15069|SJ22044|SJ15067|SJ01610}}
+
{{#set: common name=mannose-6-phosphate isomerase}}
−
{{#set: in pathway=MANNCAT-PWY|PWY-882|PWY-7456|PWY-3881|PWY-5659|PWY-6992|PWY-3861|PWY-7586}}
+
{{#set: gene associated=SJ01610|SJ15067|SJ22044|SJ15069}}
 +
{{#set: in pathway=PWY-3861|MANNCAT-PWY|PWY-5659|PWY-6992|PWY-7456|PWY-3881|PWY-7586|PWY-882}}
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction source=orthology-arabidopsis_thaliana|orthology-ectocarpus_siliculosus|orthology-nannochloropsis_salina|annotation-saccharina_japonica_genome}}
+
{{#set: reconstruction source=orthology-arabidopsis_thaliana|annotation-saccharina_japonica_genome|orthology-nannochloropsis_salina|orthology-ectocarpus_siliculosus}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 12:38, 10 January 2019

Reaction MANNPISOM-RXN

  • direction:
    • REVERSIBLE
  • ec number:
  • common name:
    • mannose-6-phosphate isomerase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 D-mannopyranose 6-phosphate[c] <=> 1 β-D-fructofuranose 6-phosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-3861, mannitol degradation II: PWY-3861
    • 2 reactions found over 4 reactions in the full pathway
  • MANNCAT-PWY, D-mannose degradation: MANNCAT-PWY
    • 1 reactions found over 1 reactions in the full pathway
  • PWY-5659, GDP-mannose biosynthesis: PWY-5659
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-6992, 1,5-anhydrofructose degradation: PWY-6992
    • 4 reactions found over 5 reactions in the full pathway
  • PWY-7456, β-(1,4)-mannan degradation: PWY-7456
    • 2 reactions found over 7 reactions in the full pathway
  • PWY-3881, mannitol biosynthesis: PWY-3881
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-7586, β-1,4-D-mannosyl-N-acetyl-D-glucosamine degradation: PWY-7586
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-882, L-ascorbate biosynthesis I (L-galactose pathway): PWY-882
    • 6 reactions found over 8 reactions in the full pathway

Reconstruction information

External links





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