Difference between revisions of "RXN-2464"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-2464 RXN-2464] == * direction: ** REVERSIBLE * common name: ** 4-hydroxy-4-methyl-2-oxoglutarat...") |
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* direction: | * direction: | ||
** REVERSIBLE | ** REVERSIBLE | ||
| − | |||
| − | |||
* ec number: | * ec number: | ||
** [http://enzyme.expasy.org/EC/4.1.3.17 EC-4.1.3.17] | ** [http://enzyme.expasy.org/EC/4.1.3.17 EC-4.1.3.17] | ||
| + | * common name: | ||
| + | ** 4-hydroxy-4-methyl-2-oxoglutarate aldolase | ||
* Synonym(s): | * Synonym(s): | ||
| Line 23: | Line 23: | ||
* [[METHYLGALLATE-DEGRADATION-PWY]], methylgallate degradation: [http://metacyc.org/META/NEW-IMAGE?object=METHYLGALLATE-DEGRADATION-PWY METHYLGALLATE-DEGRADATION-PWY] | * [[METHYLGALLATE-DEGRADATION-PWY]], methylgallate degradation: [http://metacyc.org/META/NEW-IMAGE?object=METHYLGALLATE-DEGRADATION-PWY METHYLGALLATE-DEGRADATION-PWY] | ||
** '''2''' reactions found over '''6''' reactions in the full pathway | ** '''2''' reactions found over '''6''' reactions in the full pathway | ||
| − | |||
| − | |||
* [[P184-PWY]], protocatechuate degradation I (meta-cleavage pathway): [http://metacyc.org/META/NEW-IMAGE?object=P184-PWY P184-PWY] | * [[P184-PWY]], protocatechuate degradation I (meta-cleavage pathway): [http://metacyc.org/META/NEW-IMAGE?object=P184-PWY P184-PWY] | ||
** '''2''' reactions found over '''8''' reactions in the full pathway | ** '''2''' reactions found over '''8''' reactions in the full pathway | ||
| + | * [[GALLATE-DEGRADATION-I-PWY]], gallate degradation II: [http://metacyc.org/META/NEW-IMAGE?object=GALLATE-DEGRADATION-I-PWY GALLATE-DEGRADATION-I-PWY] | ||
| + | ** '''1''' reactions found over '''5''' reactions in the full pathway | ||
* [[GALLATE-DEGRADATION-II-PWY]], gallate degradation I: [http://metacyc.org/META/NEW-IMAGE?object=GALLATE-DEGRADATION-II-PWY GALLATE-DEGRADATION-II-PWY] | * [[GALLATE-DEGRADATION-II-PWY]], gallate degradation I: [http://metacyc.org/META/NEW-IMAGE?object=GALLATE-DEGRADATION-II-PWY GALLATE-DEGRADATION-II-PWY] | ||
** '''1''' reactions found over '''4''' reactions in the full pathway | ** '''1''' reactions found over '''4''' reactions in the full pathway | ||
| Line 35: | Line 35: | ||
== External links == | == External links == | ||
* RHEA: | * RHEA: | ||
| − | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id= | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28938 28938] |
* LIGAND-RXN: | * LIGAND-RXN: | ||
** [http://www.genome.jp/dbget-bin/www_bget?R00350 R00350] | ** [http://www.genome.jp/dbget-bin/www_bget?R00350 R00350] | ||
{{#set: direction=REVERSIBLE}} | {{#set: direction=REVERSIBLE}} | ||
| − | |||
{{#set: ec number=EC-4.1.3.17}} | {{#set: ec number=EC-4.1.3.17}} | ||
| + | {{#set: common name=4-hydroxy-4-methyl-2-oxoglutarate aldolase}} | ||
{{#set: gene associated=SJ13180}} | {{#set: gene associated=SJ13180}} | ||
| − | {{#set: in pathway=METHYLGALLATE-DEGRADATION-PWY|GALLATE-DEGRADATION-I | + | {{#set: in pathway=METHYLGALLATE-DEGRADATION-PWY|P184-PWY|GALLATE-DEGRADATION-I-PWY|GALLATE-DEGRADATION-II-PWY}} |
{{#set: reconstruction category=annotation}} | {{#set: reconstruction category=annotation}} | ||
{{#set: reconstruction source=annotation-saccharina_japonica_genome}} | {{#set: reconstruction source=annotation-saccharina_japonica_genome}} | ||
{{#set: reconstruction tool=pathwaytools}} | {{#set: reconstruction tool=pathwaytools}} | ||
Latest revision as of 12:39, 10 January 2019
Contents
Reaction RXN-2464
- direction:
- REVERSIBLE
- ec number:
- common name:
- 4-hydroxy-4-methyl-2-oxoglutarate aldolase
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 4-OH-4-ACETYL-2-OXOGLUTARATE[c] <=> 1 PYRUVATE[c] + 1 OXALACETIC_ACID[c]
- With common name(s):
- 1 2-hydroxy-4-oxobutane-1,2,4-tricarboxylate[c] <=> 1 pyruvate[c] + 1 oxaloacetate[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: SJ13180
- Source: annotation-saccharina_japonica_genome
- Assignment: GO-TERM
- Source: annotation-saccharina_japonica_genome
Pathways
- METHYLGALLATE-DEGRADATION-PWY, methylgallate degradation: METHYLGALLATE-DEGRADATION-PWY
- 2 reactions found over 6 reactions in the full pathway
- P184-PWY, protocatechuate degradation I (meta-cleavage pathway): P184-PWY
- 2 reactions found over 8 reactions in the full pathway
- GALLATE-DEGRADATION-I-PWY, gallate degradation II: GALLATE-DEGRADATION-I-PWY
- 1 reactions found over 5 reactions in the full pathway
- GALLATE-DEGRADATION-II-PWY, gallate degradation I: GALLATE-DEGRADATION-II-PWY
- 1 reactions found over 4 reactions in the full pathway
Reconstruction information
- Category: annotation
- Source: annotation-saccharina_japonica_genome
- Tool: pathwaytools
- Source: annotation-saccharina_japonica_genome
External links
