Difference between revisions of "RXN-8629"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8629 RXN-8629] == * direction: ** REVERSIBLE * common name: ** H-Gcv-protein-(dihydrolipoyl)lys...") |
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| Line 3: | Line 3: | ||
* direction: | * direction: | ||
** REVERSIBLE | ** REVERSIBLE | ||
| − | |||
| − | |||
* ec number: | * ec number: | ||
** [http://enzyme.expasy.org/EC/1.8.1.4 EC-1.8.1.4] | ** [http://enzyme.expasy.org/EC/1.8.1.4 EC-1.8.1.4] | ||
| + | * common name: | ||
| + | ** H-Gcv-protein-(dihydrolipoyl)lysine:NAD+ oxidoreductase | ||
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
| − | ** 1 [[DIHYDROLIPOYL-GCVH]][c] '''+''' 1 [[NAD]][c] '''<=>''' 1 [[ | + | ** 1 [[DIHYDROLIPOYL-GCVH]][c] '''+''' 1 [[NAD]][c] '''<=>''' 1 [[PROTEIN-LIPOYLLYSINE]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c] |
* With common name(s): | * With common name(s): | ||
| − | ** 1 a [glycine-cleavage complex H protein] N6-dihydrolipoyl-L-lysine[c] '''+''' 1 NAD+[c] '''<=>''' 1 H | + | ** 1 a [glycine-cleavage complex H protein] N6-dihydrolipoyl-L-lysine[c] '''+''' 1 NAD+[c] '''<=>''' 1 a [glycine-cleavage complex H protein] N6-lipoyl-L-lysine[c] '''+''' 1 NADH[c] '''+''' 1 H+[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Genes have been associated with this reaction based on different elements listed below. | Genes have been associated with this reaction based on different elements listed below. | ||
| − | * Gene: [[ | + | * Gene: [[SJ10661]] |
** Source: [[annotation-saccharina_japonica_genome]] | ** Source: [[annotation-saccharina_japonica_genome]] | ||
*** Assignment: EC-NUMBER | *** Assignment: EC-NUMBER | ||
| − | + | * Gene: [[SJ03718]] | |
| − | * Gene: [[ | + | |
** Source: [[annotation-saccharina_japonica_genome]] | ** Source: [[annotation-saccharina_japonica_genome]] | ||
*** Assignment: EC-NUMBER | *** Assignment: EC-NUMBER | ||
| Line 28: | Line 27: | ||
*** Assignment: EC-NUMBER | *** Assignment: EC-NUMBER | ||
** Source: [[orthology-ectocarpus_siliculosus]] | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
| − | * Gene: [[ | + | * Gene: [[SJ06474]] |
** Source: [[annotation-saccharina_japonica_genome]] | ** Source: [[annotation-saccharina_japonica_genome]] | ||
*** Assignment: EC-NUMBER | *** Assignment: EC-NUMBER | ||
| + | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
== Pathways == | == Pathways == | ||
* [[GLYCLEAV-PWY]], glycine cleavage: [http://metacyc.org/META/NEW-IMAGE?object=GLYCLEAV-PWY GLYCLEAV-PWY] | * [[GLYCLEAV-PWY]], glycine cleavage: [http://metacyc.org/META/NEW-IMAGE?object=GLYCLEAV-PWY GLYCLEAV-PWY] | ||
| Line 43: | Line 43: | ||
== External links == | == External links == | ||
{{#set: direction=REVERSIBLE}} | {{#set: direction=REVERSIBLE}} | ||
| − | |||
{{#set: ec number=EC-1.8.1.4}} | {{#set: ec number=EC-1.8.1.4}} | ||
| − | {{#set: gene associated= | + | {{#set: common name=H-Gcv-protein-(dihydrolipoyl)lysine:NAD+ oxidoreductase}} |
| + | {{#set: gene associated=SJ10661|SJ03718|SJ13629|SJ06474}} | ||
{{#set: in pathway=GLYCLEAV-PWY}} | {{#set: in pathway=GLYCLEAV-PWY}} | ||
{{#set: reconstruction category=orthology|annotation}} | {{#set: reconstruction category=orthology|annotation}} | ||
| − | {{#set: reconstruction source= | + | {{#set: reconstruction source=annotation-saccharina_japonica_genome|orthology-ectocarpus_siliculosus}} |
{{#set: reconstruction tool=pantograph|pathwaytools}} | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
Latest revision as of 13:42, 10 January 2019
Contents
Reaction RXN-8629
- direction:
- REVERSIBLE
- ec number:
- common name:
- H-Gcv-protein-(dihydrolipoyl)lysine:NAD+ oxidoreductase
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 DIHYDROLIPOYL-GCVH[c] + 1 NAD[c] <=> 1 PROTEIN-LIPOYLLYSINE[c] + 1 NADH[c] + 1 PROTON[c]
- With common name(s):
- 1 a [glycine-cleavage complex H protein] N6-dihydrolipoyl-L-lysine[c] + 1 NAD+[c] <=> 1 a [glycine-cleavage complex H protein] N6-lipoyl-L-lysine[c] + 1 NADH[c] + 1 H+[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: SJ10661
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: annotation-saccharina_japonica_genome
- Gene: SJ03718
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: annotation-saccharina_japonica_genome
- Gene: SJ13629
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: orthology-ectocarpus_siliculosus
- Source: annotation-saccharina_japonica_genome
- Gene: SJ06474
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: orthology-ectocarpus_siliculosus
- Source: annotation-saccharina_japonica_genome
Pathways
- GLYCLEAV-PWY, glycine cleavage: GLYCLEAV-PWY
- 3 reactions found over 3 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-ectocarpus_siliculosus
- Tool: pantograph
- Source: orthology-ectocarpus_siliculosus
- Category: annotation
- Source: annotation-saccharina_japonica_genome
- Tool: pathwaytools
- Source: annotation-saccharina_japonica_genome
