Difference between revisions of "RXN3O-218"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN3O-218 RXN3O-218] == * direction: ** LEFT-TO-RIGHT * common name: ** epi-sterol-desaturase * ec...") |
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| Line 3: | Line 3: | ||
* direction: | * direction: | ||
** LEFT-TO-RIGHT | ** LEFT-TO-RIGHT | ||
| − | |||
| − | |||
* ec number: | * ec number: | ||
** [http://enzyme.expasy.org/EC/1.14.19.20 EC-1.14.19.20] | ** [http://enzyme.expasy.org/EC/1.14.19.20 EC-1.14.19.20] | ||
| + | * common name: | ||
| + | ** epi-sterol-desaturase | ||
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
| − | ** 1 [[ | + | ** 1 [[EPISTEROL]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 2 [[FERROCYTOCHROME-B5]][c] '''+''' 2 [[PROTON]][c] '''=>''' 1 [[CPD-700]][c] '''+''' 2 [[WATER]][c] '''+''' 2 [[FERRICYTOCHROME-B5]][c] |
* With common name(s): | * With common name(s): | ||
| − | ** 1 | + | ** 1 episterol[c] '''+''' 1 oxygen[c] '''+''' 2 a ferrocytochrome b5[c] '''+''' 2 H+[c] '''=>''' 1 ergosta-5,7,24(28)-trien-3β-ol[c] '''+''' 2 H2O[c] '''+''' 2 a ferricytochrome b5[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Genes have been associated with this reaction based on different elements listed below. | Genes have been associated with this reaction based on different elements listed below. | ||
| − | |||
| − | |||
| − | |||
* Gene: [[SJ11625]] | * Gene: [[SJ11625]] | ||
** Source: [[annotation-saccharina_japonica_genome]] | ** Source: [[annotation-saccharina_japonica_genome]] | ||
*** Assignment: EC-NUMBER | *** Assignment: EC-NUMBER | ||
| − | |||
** Source: [[orthology-arabidopsis_thaliana]] | ** Source: [[orthology-arabidopsis_thaliana]] | ||
| + | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
| + | * Gene: [[SJ00834]] | ||
| + | ** Source: [[annotation-saccharina_japonica_genome]] | ||
| + | *** Assignment: EC-NUMBER | ||
== Pathways == | == Pathways == | ||
| − | |||
| − | |||
* [[PWY-2541]], plant sterol biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2541 PWY-2541] | * [[PWY-2541]], plant sterol biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2541 PWY-2541] | ||
** '''11''' reactions found over '''36''' reactions in the full pathway | ** '''11''' reactions found over '''36''' reactions in the full pathway | ||
| + | * [[PWY-6075]], ergosterol biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6075 PWY-6075] | ||
| + | ** '''3''' reactions found over '''5''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
* Category: [[orthology]] | * Category: [[orthology]] | ||
| Line 41: | Line 41: | ||
== External links == | == External links == | ||
* RHEA: | * RHEA: | ||
| − | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id= | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=33464 33464] |
* LIGAND-RXN: | * LIGAND-RXN: | ||
** [http://www.genome.jp/dbget-bin/www_bget?R07505 R07505] | ** [http://www.genome.jp/dbget-bin/www_bget?R07505 R07505] | ||
** [http://www.genome.jp/dbget-bin/www_bget?R07491 R07491] | ** [http://www.genome.jp/dbget-bin/www_bget?R07491 R07491] | ||
{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
| − | |||
{{#set: ec number=EC-1.14.19.20}} | {{#set: ec number=EC-1.14.19.20}} | ||
| − | {{#set: gene associated= | + | {{#set: common name=epi-sterol-desaturase}} |
| − | {{#set: in pathway=PWY- | + | {{#set: gene associated=SJ11625|SJ00834}} |
| + | {{#set: in pathway=PWY-2541|PWY-6075}} | ||
{{#set: reconstruction category=orthology|annotation}} | {{#set: reconstruction category=orthology|annotation}} | ||
{{#set: reconstruction source=orthology-arabidopsis_thaliana|orthology-ectocarpus_siliculosus|annotation-saccharina_japonica_genome}} | {{#set: reconstruction source=orthology-arabidopsis_thaliana|orthology-ectocarpus_siliculosus|annotation-saccharina_japonica_genome}} | ||
{{#set: reconstruction tool=pantograph|pathwaytools}} | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
Latest revision as of 13:44, 10 January 2019
Contents
Reaction RXN3O-218
- direction:
- LEFT-TO-RIGHT
- ec number:
- common name:
- epi-sterol-desaturase
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 EPISTEROL[c] + 1 OXYGEN-MOLECULE[c] + 2 FERROCYTOCHROME-B5[c] + 2 PROTON[c] => 1 CPD-700[c] + 2 WATER[c] + 2 FERRICYTOCHROME-B5[c]
- With common name(s):
- 1 episterol[c] + 1 oxygen[c] + 2 a ferrocytochrome b5[c] + 2 H+[c] => 1 ergosta-5,7,24(28)-trien-3β-ol[c] + 2 H2O[c] + 2 a ferricytochrome b5[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: SJ11625
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: orthology-arabidopsis_thaliana
- Source: orthology-ectocarpus_siliculosus
- Source: annotation-saccharina_japonica_genome
- Gene: SJ00834
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: annotation-saccharina_japonica_genome
Pathways
- PWY-2541, plant sterol biosynthesis: PWY-2541
- 11 reactions found over 36 reactions in the full pathway
- PWY-6075, ergosterol biosynthesis I: PWY-6075
- 3 reactions found over 5 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-arabidopsis_thaliana
- Tool: pantograph
- Source: orthology-ectocarpus_siliculosus
- Tool: pantograph
- Source: orthology-arabidopsis_thaliana
- Category: annotation
- Source: annotation-saccharina_japonica_genome
- Tool: pathwaytools
- Source: annotation-saccharina_japonica_genome
External links
