Difference between revisions of "2.4.1.119-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.4.1.119-RXN 2.4.1.119-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** dolichyl-diphosphoo...")
 
 
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* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/2.4.99.18 EC-2.4.99.18]
 
* common name:
 
* common name:
 
** dolichyl-diphosphooligosaccharide-protein glycotransferase
 
** dolichyl-diphosphooligosaccharide-protein glycotransferase
 
** dolichyl-diphospho-oligosaccharide-protein glycosyltransferase
 
** dolichyl-diphospho-oligosaccharide-protein glycosyltransferase
−
* ec number:
 
−
** [http://enzyme.expasy.org/EC/2.4.99.18 EC-2.4.99.18]
 
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[Protein-L-Asparagine]][c] '''+''' 1 [[CPD-18076]][c] '''=>''' 1 [[CPD-224]][c] '''+''' 1 [[CPD-18077]][c] '''+''' 1 [[PROTON]][c]
+
** 1 [[CPD-18076]][c] '''+''' 1 [[Protein-L-Asparagine]][c] '''=>''' 1 [[CPD-224]][c] '''+''' 1 [[CPD-18077]][c] '''+''' 1 [[PROTON]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 a [protein]-L-asparagine[c] '''+''' 1 α-D-Glc-(1→2)-α-D-Glc-(1→3)-α-D-Glc-(1→3)-α-D-Man-(1→2)-α-D-Man-(1→2)-α-D-Man-(1→3)-[α-D-Man-(1→2)-α-D-Man-(1→3)-[α-D-Man-(1→2)-α-D-Man-(1→6)]-α-D-Man-(1→6)]-β-D-Man-(1→4)-β-D-GlcNAc-(1→4)-α-D-GlcNAc-diphosphodolichol[c] '''=>''' 1 a dolichyl diphosphate[c] '''+''' 1 a [protein]-L-asparagine-[(glucosyl)3(mannosyl)9(N-acetylglucosaminyl)2][c] '''+''' 1 H+[c]
+
** 1 α-D-Glc-(1→2)-α-D-Glc-(1→3)-α-D-Glc-(1→3)-α-D-Man-(1→2)-α-D-Man-(1→2)-α-D-Man-(1→3)-[α-D-Man-(1→2)-α-D-Man-(1→3)-[α-D-Man-(1→2)-α-D-Man-(1→6)]-α-D-Man-(1→6)]-β-D-Man-(1→4)-β-D-GlcNAc-(1→4)-α-D-GlcNAc-diphosphodolichol[c] '''+''' 1 a [protein]-L-asparagine[c] '''=>''' 1 a dolichyl diphosphate[c] '''+''' 1 Glc3Man9GlcNAc2-[protein][c] '''+''' 1 H+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[SJ04308]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 
* Gene: [[SJ18586]]
 
* Gene: [[SJ18586]]
−
** Source: [[annotation-saccharina_japonica_genome]]
 
−
*** Assignment: GO-TERM
 
−
** Source: [[orthology-ectocarpus_siliculosus]]
 
−
* Gene: [[SJ12004]]
 
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
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** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
* Gene: [[SJ12004]]
 +
** Source: [[annotation-saccharina_japonica_genome]]
 +
*** Assignment: GO-TERM
 
** Source: [[orthology-ectocarpus_siliculosus]]
 
** Source: [[orthology-ectocarpus_siliculosus]]
 
* Gene: [[SJ02055]]
 
* Gene: [[SJ02055]]
Line 37: Line 39:
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
** Source: [[orthology-ectocarpus_siliculosus]]
 
−
* Gene: [[SJ04308]]
 
 
** Source: [[orthology-ectocarpus_siliculosus]]
 
** Source: [[orthology-ectocarpus_siliculosus]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS]], protein N-glycosylation (eukaryotic, high mannose): [http://metacyc.org/META/NEW-IMAGE?object=MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS]
+
* [[MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS]], protein N-glycosylation initial phase (eukaryotic): [http://metacyc.org/META/NEW-IMAGE?object=MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS]
−
** '''19''' reactions found over '''19''' reactions in the full pathway
+
** '''16''' reactions found over '''19''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
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*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=50349 50349]
 
* UNIPROT:
 
* UNIPROT:
 
** [http://www.uniprot.org/uniprot/P39656 P39656]
 
** [http://www.uniprot.org/uniprot/P39656 P39656]
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** [http://www.uniprot.org/uniprot/Q10176 Q10176]
 
** [http://www.uniprot.org/uniprot/Q10176 Q10176]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: ec number=EC-2.4.99.18}}
 
{{#set: common name=dolichyl-diphosphooligosaccharide-protein glycotransferase}}
 
{{#set: common name=dolichyl-diphosphooligosaccharide-protein glycotransferase}}
 
{{#set: common name=dolichyl-diphospho-oligosaccharide-protein glycosyltransferase}}
 
{{#set: common name=dolichyl-diphospho-oligosaccharide-protein glycosyltransferase}}
−
{{#set: ec number=EC-2.4.99.18}}
+
{{#set: gene associated=SJ04308|SJ18586|SJ19404|SJ12004|SJ02055|SJ08534}}
−
{{#set: gene associated=SJ18586|SJ12004|SJ19404|SJ02055|SJ08534|SJ04308}}
+
 
{{#set: in pathway=MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS}}
 
{{#set: in pathway=MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS}}
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction source=orthology-ectocarpus_siliculosus|annotation-saccharina_japonica_genome}}
 
{{#set: reconstruction source=orthology-ectocarpus_siliculosus|annotation-saccharina_japonica_genome}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 13:46, 10 January 2019

Reaction 2.4.1.119-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • common name:
    • dolichyl-diphosphooligosaccharide-protein glycotransferase
    • dolichyl-diphospho-oligosaccharide-protein glycosyltransferase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 α-D-Glc-(1→2)-α-D-Glc-(1→3)-α-D-Glc-(1→3)-α-D-Man-(1→2)-α-D-Man-(1→2)-α-D-Man-(1→3)-[α-D-Man-(1→2)-α-D-Man-(1→3)-[α-D-Man-(1→2)-α-D-Man-(1→6)]-α-D-Man-(1→6)]-β-D-Man-(1→4)-β-D-GlcNAc-(1→4)-α-D-GlcNAc-diphosphodolichol[c] + 1 a [protein]-L-asparagine[c] => 1 a dolichyl diphosphate[c] + 1 Glc3Man9GlcNAc2-[protein][c] + 1 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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