Difference between revisions of "ADENODEAMIN-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ADENODEAMIN-RXN ADENODEAMIN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** adenosine deami...")
 
 
Line 3: Line 3:
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
−
* common name:
 
−
** adenosine deaminase
 
 
* ec number:
 
* ec number:
 
** [http://enzyme.expasy.org/EC/3.5.4.4 EC-3.5.4.4]
 
** [http://enzyme.expasy.org/EC/3.5.4.4 EC-3.5.4.4]
 +
* common name:
 +
** adenosine deaminase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[ADENOSINE]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[INOSINE]][c] '''+''' 1 [[AMMONIUM]][c]
+
** 1 [[ADENOSINE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[INOSINE]][c] '''+''' 1 [[AMMONIUM]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 adenosine[c] '''+''' 1 H2O[c] '''+''' 1 H+[c] '''=>''' 1 inosine[c] '''+''' 1 ammonium[c]
+
** 1 adenosine[c] '''+''' 1 H+[c] '''+''' 1 H2O[c] '''=>''' 1 inosine[c] '''+''' 1 ammonium[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[SJ20035]]
+
* Gene: [[SJ10996]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
−
*** Assignment: GO-TERM
+
*** Assignment: EC-NUMBER
−
* Gene: [[SJ17056]]
+
** Source: [[orthology-arabidopsis_thaliana]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
* Gene: [[SJ04837]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
** Source: [[orthology-ectocarpus_siliculosus]]
 
 
* Gene: [[SJ11072]]
 
* Gene: [[SJ11072]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ04837]]
+
* Gene: [[SJ20035]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ12082]]
+
* Gene: [[SJ22508]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ22508]]
+
* Gene: [[SJ12082]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ10996]]
+
* Gene: [[SJ17056]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
−
*** Assignment: EC-NUMBER
+
*** Assignment: GO-TERM
 
** Source: [[orthology-ectocarpus_siliculosus]]
 
** Source: [[orthology-ectocarpus_siliculosus]]
−
** Source: [[orthology-arabidopsis_thaliana]]
 
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY0-1296]], purine ribonucleosides degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1296 PWY0-1296]
+
* [[PWY-6611]], adenine and adenosine salvage V: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6611 PWY-6611]
−
** '''6''' reactions found over '''6''' reactions in the full pathway
+
** '''2''' reactions found over '''3''' reactions in the full pathway
 
* [[PWY-6609]], adenine and adenosine salvage III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6609 PWY-6609]
 
* [[PWY-6609]], adenine and adenosine salvage III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6609 PWY-6609]
 
** '''4''' reactions found over '''4''' reactions in the full pathway
 
** '''4''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY0-1296]], purine ribonucleosides degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1296 PWY0-1296]
 +
** '''6''' reactions found over '''6''' reactions in the full pathway
 
* [[SALVADEHYPOX-PWY]], adenosine nucleotides degradation II: [http://metacyc.org/META/NEW-IMAGE?object=SALVADEHYPOX-PWY SALVADEHYPOX-PWY]
 
* [[SALVADEHYPOX-PWY]], adenosine nucleotides degradation II: [http://metacyc.org/META/NEW-IMAGE?object=SALVADEHYPOX-PWY SALVADEHYPOX-PWY]
 
** '''5''' reactions found over '''5''' reactions in the full pathway
 
** '''5''' reactions found over '''5''' reactions in the full pathway
−
* [[PWY-6611]], adenine and adenosine salvage V: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6611 PWY-6611]
 
−
** '''2''' reactions found over '''3''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
Line 72: Line 72:
 
** [http://www.uniprot.org/uniprot/P53984 P53984]
 
** [http://www.uniprot.org/uniprot/P53984 P53984]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=adenosine deaminase}}
 
 
{{#set: ec number=EC-3.5.4.4}}
 
{{#set: ec number=EC-3.5.4.4}}
−
{{#set: gene associated=SJ20035|SJ17056|SJ11072|SJ04837|SJ12082|SJ22508|SJ10996}}
+
{{#set: common name=adenosine deaminase}}
−
{{#set: in pathway=PWY0-1296|PWY-6609|SALVADEHYPOX-PWY|PWY-6611}}
+
{{#set: gene associated=SJ10996|SJ04837|SJ11072|SJ20035|SJ22508|SJ12082|SJ17056}}
 +
{{#set: in pathway=PWY-6611|PWY-6609|PWY0-1296|SALVADEHYPOX-PWY}}
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction source=orthology-arabidopsis_thaliana|orthology-ectocarpus_siliculosus|annotation-saccharina_japonica_genome}}
+
{{#set: reconstruction source=orthology-arabidopsis_thaliana|annotation-saccharina_japonica_genome|orthology-ectocarpus_siliculosus}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 12:54, 10 January 2019

Reaction ADENODEAMIN-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • common name:
    • adenosine deaminase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 adenosine[c] + 1 H+[c] + 1 H2O[c] => 1 inosine[c] + 1 ammonium[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6611, adenine and adenosine salvage V: PWY-6611
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-6609, adenine and adenosine salvage III: PWY-6609
    • 4 reactions found over 4 reactions in the full pathway
  • PWY0-1296, purine ribonucleosides degradation: PWY0-1296
    • 6 reactions found over 6 reactions in the full pathway
  • SALVADEHYPOX-PWY, adenosine nucleotides degradation II: SALVADEHYPOX-PWY
    • 5 reactions found over 5 reactions in the full pathway

Reconstruction information

External links





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