Difference between revisions of "PGLUCISOM-RXN"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PGLUCISOM-RXN PGLUCISOM-RXN] == * direction: ** REVERSIBLE * common name: ** phosphoglucose isomera...") |
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* direction: | * direction: | ||
** REVERSIBLE | ** REVERSIBLE | ||
− | |||
− | |||
* ec number: | * ec number: | ||
** [http://enzyme.expasy.org/EC/5.3.1.9 EC-5.3.1.9] | ** [http://enzyme.expasy.org/EC/5.3.1.9 EC-5.3.1.9] | ||
+ | * common name: | ||
+ | ** phosphoglucose isomerase | ||
* Synonym(s): | * Synonym(s): | ||
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** Source: [[orthology-ectocarpus_siliculosus]] | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
== Pathways == | == Pathways == | ||
− | * [[ | + | * [[SUCSYN-PWY]], sucrose biosynthesis I (from photosynthesis): [http://metacyc.org/META/NEW-IMAGE?object=SUCSYN-PWY SUCSYN-PWY] |
− | + | ** '''6''' reactions found over '''9''' reactions in the full pathway | |
− | + | * [[GLUCONEO-PWY]], gluconeogenesis I: [http://metacyc.org/META/NEW-IMAGE?object=GLUCONEO-PWY GLUCONEO-PWY] | |
− | + | ** '''12''' reactions found over '''13''' reactions in the full pathway | |
− | + | ||
− | ** ''' | + | |
− | + | ||
− | + | ||
− | * [[ | + | |
− | ** '''12''' reactions found over ''' | + | |
− | + | ||
− | + | ||
− | + | ||
− | + | ||
* [[PWY-6981]], chitin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6981 PWY-6981] | * [[PWY-6981]], chitin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6981 PWY-6981] | ||
** '''4''' reactions found over '''8''' reactions in the full pathway | ** '''4''' reactions found over '''8''' reactions in the full pathway | ||
− | * [[ | + | * [[PWY-7238]], sucrose biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7238 PWY-7238] |
− | ** ''' | + | ** '''5''' reactions found over '''8''' reactions in the full pathway |
− | * [[PWY- | + | * [[PWY-5659]], GDP-mannose biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5659 PWY-5659] |
** '''3''' reactions found over '''4''' reactions in the full pathway | ** '''3''' reactions found over '''4''' reactions in the full pathway | ||
+ | * [[ANAGLYCOLYSIS-PWY]], glycolysis III (from glucose): [http://metacyc.org/META/NEW-IMAGE?object=ANAGLYCOLYSIS-PWY ANAGLYCOLYSIS-PWY] | ||
+ | ** '''10''' reactions found over '''10''' reactions in the full pathway | ||
+ | * [[P122-PWY]], heterolactic fermentation: [http://metacyc.org/META/NEW-IMAGE?object=P122-PWY P122-PWY] | ||
+ | ** '''16''' reactions found over '''18''' reactions in the full pathway | ||
* [[PWY-7347]], sucrose biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7347 PWY-7347] | * [[PWY-7347]], sucrose biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7347 PWY-7347] | ||
** '''1''' reactions found over '''3''' reactions in the full pathway | ** '''1''' reactions found over '''3''' reactions in the full pathway | ||
− | * [[ | + | * [[PWY-5514]], UDP-N-acetyl-D-galactosamine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5514 PWY-5514] |
− | ** ''' | + | ** '''5''' reactions found over '''7''' reactions in the full pathway |
− | * [[ | + | * [[P341-PWY]], glycolysis V (Pyrococcus): [http://metacyc.org/META/NEW-IMAGE?object=P341-PWY P341-PWY] |
** '''6''' reactions found over '''9''' reactions in the full pathway | ** '''6''' reactions found over '''9''' reactions in the full pathway | ||
* [[UDPNAGSYN-PWY]], UDP-N-acetyl-D-glucosamine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=UDPNAGSYN-PWY UDPNAGSYN-PWY] | * [[UDPNAGSYN-PWY]], UDP-N-acetyl-D-glucosamine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=UDPNAGSYN-PWY UDPNAGSYN-PWY] | ||
** '''4''' reactions found over '''5''' reactions in the full pathway | ** '''4''' reactions found over '''5''' reactions in the full pathway | ||
+ | * [[GLYCOLYSIS]], glycolysis I (from glucose 6-phosphate): [http://metacyc.org/META/NEW-IMAGE?object=GLYCOLYSIS GLYCOLYSIS] | ||
+ | ** '''11''' reactions found over '''12''' reactions in the full pathway | ||
+ | * [[P124-PWY]], Bifidobacterium shunt: [http://metacyc.org/META/NEW-IMAGE?object=P124-PWY P124-PWY] | ||
+ | ** '''12''' reactions found over '''15''' reactions in the full pathway | ||
+ | * [[PWY-5054]], sorbitol biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5054 PWY-5054] | ||
+ | ** '''1''' reactions found over '''3''' reactions in the full pathway | ||
+ | * [[RUMP-PWY]], formaldehyde oxidation I: [http://metacyc.org/META/NEW-IMAGE?object=RUMP-PWY RUMP-PWY] | ||
+ | ** '''4''' reactions found over '''6''' reactions in the full pathway | ||
* [[PWY-621]], sucrose degradation III (sucrose invertase): [http://metacyc.org/META/NEW-IMAGE?object=PWY-621 PWY-621] | * [[PWY-621]], sucrose degradation III (sucrose invertase): [http://metacyc.org/META/NEW-IMAGE?object=PWY-621 PWY-621] | ||
** '''3''' reactions found over '''4''' reactions in the full pathway | ** '''3''' reactions found over '''4''' reactions in the full pathway | ||
+ | * [[PWY-5384]], sucrose degradation IV (sucrose phosphorylase): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5384 PWY-5384] | ||
+ | ** '''3''' reactions found over '''4''' reactions in the full pathway | ||
+ | * [[PWY-6992]], 1,5-anhydrofructose degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6992 PWY-6992] | ||
+ | ** '''4''' reactions found over '''5''' reactions in the full pathway | ||
+ | * [[PWY-6142]], gluconeogenesis II (Methanobacterium thermoautotrophicum): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6142 PWY-6142] | ||
+ | ** '''10''' reactions found over '''15''' reactions in the full pathway | ||
+ | * [[PWY-7385]], 1,3-propanediol biosynthesis (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7385 PWY-7385] | ||
+ | ** '''7''' reactions found over '''9''' reactions in the full pathway | ||
* [[PWY-622]], starch biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-622 PWY-622] | * [[PWY-622]], starch biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-622 PWY-622] | ||
** '''2''' reactions found over '''10''' reactions in the full pathway | ** '''2''' reactions found over '''10''' reactions in the full pathway | ||
− | * [[PWY- | + | * [[PWY-3801]], sucrose degradation II (sucrose synthase): [http://metacyc.org/META/NEW-IMAGE?object=PWY-3801 PWY-3801] |
− | + | ||
− | + | ||
** '''4''' reactions found over '''5''' reactions in the full pathway | ** '''4''' reactions found over '''5''' reactions in the full pathway | ||
− | * [[ | + | * [[PWY66-399]], gluconeogenesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY66-399 PWY66-399] |
− | + | ** '''11''' reactions found over '''12''' reactions in the full pathway | |
− | + | ||
− | + | ||
− | + | ||
− | + | ||
− | + | ||
− | + | ||
− | + | ||
− | ** ''' | + | |
== Reconstruction information == | == Reconstruction information == | ||
* Category: [[orthology]] | * Category: [[orthology]] | ||
Line 81: | Line 81: | ||
== External links == | == External links == | ||
* RHEA: | * RHEA: | ||
− | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id= | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11819 11819] |
* LIGAND-RXN: | * LIGAND-RXN: | ||
** [http://www.genome.jp/dbget-bin/www_bget?R00771 R00771] | ** [http://www.genome.jp/dbget-bin/www_bget?R00771 R00771] | ||
Line 125: | Line 125: | ||
** [http://www.uniprot.org/uniprot/Q9X670 Q9X670] | ** [http://www.uniprot.org/uniprot/Q9X670 Q9X670] | ||
{{#set: direction=REVERSIBLE}} | {{#set: direction=REVERSIBLE}} | ||
− | |||
{{#set: ec number=EC-5.3.1.9}} | {{#set: ec number=EC-5.3.1.9}} | ||
+ | {{#set: common name=phosphoglucose isomerase}} | ||
{{#set: gene associated=SJ00085|SJ08179}} | {{#set: gene associated=SJ00085|SJ08179}} | ||
− | {{#set: in pathway= | + | {{#set: in pathway=SUCSYN-PWY|GLUCONEO-PWY|PWY-6981|PWY-7238|PWY-5659|ANAGLYCOLYSIS-PWY|P122-PWY|PWY-7347|PWY-5514|P341-PWY|UDPNAGSYN-PWY|GLYCOLYSIS|P124-PWY|PWY-5054|RUMP-PWY|PWY-621|PWY-5384|PWY-6992|PWY-6142|PWY-7385|PWY-622|PWY-3801|PWY66-399}} |
{{#set: reconstruction category=orthology|annotation}} | {{#set: reconstruction category=orthology|annotation}} | ||
− | {{#set: reconstruction source= | + | {{#set: reconstruction source=annotation-saccharina_japonica_genome|orthology-ectocarpus_siliculosus}} |
{{#set: reconstruction tool=pantograph|pathwaytools}} | {{#set: reconstruction tool=pantograph|pathwaytools}} |
Latest revision as of 13:54, 10 January 2019
Contents
Reaction PGLUCISOM-RXN
- direction:
- REVERSIBLE
- ec number:
- common name:
- phosphoglucose isomerase
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 D-glucopyranose-6-phosphate[c] <=> 1 FRUCTOSE-6P[c]
- With common name(s):
- 1 D-glucopyranose 6-phosphate[c] <=> 1 β-D-fructofuranose 6-phosphate[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: SJ00085
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: orthology-ectocarpus_siliculosus
- Source: annotation-saccharina_japonica_genome
- Gene: SJ08179
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: orthology-ectocarpus_siliculosus
- Source: annotation-saccharina_japonica_genome
Pathways
- SUCSYN-PWY, sucrose biosynthesis I (from photosynthesis): SUCSYN-PWY
- 6 reactions found over 9 reactions in the full pathway
- GLUCONEO-PWY, gluconeogenesis I: GLUCONEO-PWY
- 12 reactions found over 13 reactions in the full pathway
- PWY-6981, chitin biosynthesis: PWY-6981
- 4 reactions found over 8 reactions in the full pathway
- PWY-7238, sucrose biosynthesis II: PWY-7238
- 5 reactions found over 8 reactions in the full pathway
- PWY-5659, GDP-mannose biosynthesis: PWY-5659
- 3 reactions found over 4 reactions in the full pathway
- ANAGLYCOLYSIS-PWY, glycolysis III (from glucose): ANAGLYCOLYSIS-PWY
- 10 reactions found over 10 reactions in the full pathway
- P122-PWY, heterolactic fermentation: P122-PWY
- 16 reactions found over 18 reactions in the full pathway
- PWY-7347, sucrose biosynthesis III: PWY-7347
- 1 reactions found over 3 reactions in the full pathway
- PWY-5514, UDP-N-acetyl-D-galactosamine biosynthesis II: PWY-5514
- 5 reactions found over 7 reactions in the full pathway
- P341-PWY, glycolysis V (Pyrococcus): P341-PWY
- 6 reactions found over 9 reactions in the full pathway
- UDPNAGSYN-PWY, UDP-N-acetyl-D-glucosamine biosynthesis I: UDPNAGSYN-PWY
- 4 reactions found over 5 reactions in the full pathway
- GLYCOLYSIS, glycolysis I (from glucose 6-phosphate): GLYCOLYSIS
- 11 reactions found over 12 reactions in the full pathway
- P124-PWY, Bifidobacterium shunt: P124-PWY
- 12 reactions found over 15 reactions in the full pathway
- PWY-5054, sorbitol biosynthesis I: PWY-5054
- 1 reactions found over 3 reactions in the full pathway
- RUMP-PWY, formaldehyde oxidation I: RUMP-PWY
- 4 reactions found over 6 reactions in the full pathway
- PWY-621, sucrose degradation III (sucrose invertase): PWY-621
- 3 reactions found over 4 reactions in the full pathway
- PWY-5384, sucrose degradation IV (sucrose phosphorylase): PWY-5384
- 3 reactions found over 4 reactions in the full pathway
- PWY-6992, 1,5-anhydrofructose degradation: PWY-6992
- 4 reactions found over 5 reactions in the full pathway
- PWY-6142, gluconeogenesis II (Methanobacterium thermoautotrophicum): PWY-6142
- 10 reactions found over 15 reactions in the full pathway
- PWY-7385, 1,3-propanediol biosynthesis (engineered): PWY-7385
- 7 reactions found over 9 reactions in the full pathway
- PWY-622, starch biosynthesis: PWY-622
- 2 reactions found over 10 reactions in the full pathway
- PWY-3801, sucrose degradation II (sucrose synthase): PWY-3801
- 4 reactions found over 5 reactions in the full pathway
- PWY66-399, gluconeogenesis III: PWY66-399
- 11 reactions found over 12 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-ectocarpus_siliculosus
- Tool: pantograph
- Source: orthology-ectocarpus_siliculosus
- Category: annotation
- Source: annotation-saccharina_japonica_genome
- Tool: pathwaytools
- Source: annotation-saccharina_japonica_genome
External links
- RHEA:
- LIGAND-RXN:
- UNIPROT: