Difference between revisions of "METHYLCROTONYL-COA-CARBOXYLASE-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=METHYLCROTONYL-COA-CARBOXYLASE-RXN METHYLCROTONYL-COA-CARBOXYLASE-RXN] == * direction: ** LEFT-TO-R...")
 
 
Line 3: Line 3:
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
−
* common name:
 
−
** 3-methylcrotonyl-CoA carboxylase
 
 
* ec number:
 
* ec number:
 
** [http://enzyme.expasy.org/EC/6.4.1.4 EC-6.4.1.4]
 
** [http://enzyme.expasy.org/EC/6.4.1.4 EC-6.4.1.4]
 +
* common name:
 +
** 3-methylcrotonyl-CoA carboxylase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[HCO3]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[3-METHYL-CROTONYL-COA]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[TRANS-3-METHYL-GLUTACONYL-COA]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Pi]][c]
+
** 1 [[HCO3]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[3-METHYL-CROTONYL-COA]][c] '''=>''' 1 [[TRANS-3-METHYL-GLUTACONYL-COA]][c] '''+''' 1 [[ADP]][c] '''+''' 1 [[Pi]][c] '''+''' 1 [[PROTON]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 hydrogencarbonate[c] '''+''' 1 ATP[c] '''+''' 1 3-methylcrotonyl-CoA[c] '''=>''' 1 ADP[c] '''+''' 1 3-methylglutaconyl-CoA[c] '''+''' 1 H+[c] '''+''' 1 phosphate[c]
+
** 1 hydrogencarbonate[c] '''+''' 1 ATP[c] '''+''' 1 3-methylcrotonyl-CoA[c] '''=>''' 1 3-methylglutaconyl-CoA[c] '''+''' 1 ADP[c] '''+''' 1 phosphate[c] '''+''' 1 H+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[SJ02214]]
+
* Gene: [[SJ12008]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
−
** Source: [[orthology-nannochloropsis_salina]]
+
** Source: [[orthology-arabidopsis_thaliana]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 
* Gene: [[SJ08104]]
 
* Gene: [[SJ08104]]
 
** Source: [[orthology-nannochloropsis_salina]]
 
** Source: [[orthology-nannochloropsis_salina]]
−
* Gene: [[SJ12008]]
+
* Gene: [[SJ19835]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
−
** Source: [[orthology-ectocarpus_siliculosus]]
+
* Gene: [[SJ02214]]
−
** Source: [[orthology-arabidopsis_thaliana]]
+
−
* Gene: [[SJ19835]]
+
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-nannochloropsis_salina]]
 
== Pathways  ==
 
== Pathways  ==
 
* [[LEU-DEG2-PWY]], L-leucine degradation I: [http://metacyc.org/META/NEW-IMAGE?object=LEU-DEG2-PWY LEU-DEG2-PWY]
 
* [[LEU-DEG2-PWY]], L-leucine degradation I: [http://metacyc.org/META/NEW-IMAGE?object=LEU-DEG2-PWY LEU-DEG2-PWY]
−
** '''6''' reactions found over '''6''' reactions in the full pathway
+
** '''4''' reactions found over '''6''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
 
** Source: [[orthology-arabidopsis_thaliana]]
 
** Source: [[orthology-arabidopsis_thaliana]]
−
*** Tool: [[pantograph]]
 
−
** Source: [[orthology-ectocarpus_siliculosus]]
 
 
*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
 
** Source: [[orthology-nannochloropsis_salina]]
 
** Source: [[orthology-nannochloropsis_salina]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 
*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
 
* Category: [[annotation]]
 
* Category: [[annotation]]
Line 47: Line 47:
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13589 13589]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13590 13590]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
 
** [http://www.genome.jp/dbget-bin/www_bget?R04138 R04138]
 
** [http://www.genome.jp/dbget-bin/www_bget?R04138 R04138]
Line 54: Line 54:
 
** [http://www.uniprot.org/uniprot/Q42777 Q42777]
 
** [http://www.uniprot.org/uniprot/Q42777 Q42777]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=3-methylcrotonyl-CoA carboxylase}}
 
 
{{#set: ec number=EC-6.4.1.4}}
 
{{#set: ec number=EC-6.4.1.4}}
−
{{#set: gene associated=SJ02214|SJ08104|SJ12008|SJ19835}}
+
{{#set: common name=3-methylcrotonyl-CoA carboxylase}}
 +
{{#set: gene associated=SJ12008|SJ08104|SJ19835|SJ02214}}
 
{{#set: in pathway=LEU-DEG2-PWY}}
 
{{#set: in pathway=LEU-DEG2-PWY}}
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction source=orthology-arabidopsis_thaliana|orthology-ectocarpus_siliculosus|orthology-nannochloropsis_salina|annotation-saccharina_japonica_genome}}
 
{{#set: reconstruction source=orthology-arabidopsis_thaliana|orthology-ectocarpus_siliculosus|orthology-nannochloropsis_salina|annotation-saccharina_japonica_genome}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 13:56, 10 January 2019

Reaction METHYLCROTONYL-COA-CARBOXYLASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • common name:
    • 3-methylcrotonyl-CoA carboxylase
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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