Difference between revisions of "RXN-15129"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15129 RXN-15129] == * direction: ** LEFT-TO-RIGHT * common name: ** cystathionine gamma-lyase *...") |
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== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
− | ** 1 [[CYS]][c] '''=>''' 1 [[HS | + | ** 1 [[CYS]][c] '''=>''' 1 [[HS]][c] '''+''' 1 [[2-AMINOACRYLATE]][c] |
* With common name(s): | * With common name(s): | ||
− | ** 1 L-cysteine[c] '''=>''' 1 hydrogen sulfide | + | ** 1 L-cysteine[c] '''=>''' 1 hydrogen sulfide[c] '''+''' 1 2-aminoprop-2-enoate[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Genes have been associated with this reaction based on different elements listed below. | Genes have been associated with this reaction based on different elements listed below. | ||
+ | * Gene: [[SJ05357]] | ||
+ | ** Source: [[annotation-saccharina_japonica_genome]] | ||
+ | *** Assignment: GO-TERM | ||
* Gene: [[SJ05358]] | * Gene: [[SJ05358]] | ||
** Source: [[annotation-saccharina_japonica_genome]] | ** Source: [[annotation-saccharina_japonica_genome]] | ||
Line 23: | Line 26: | ||
*** Assignment: EC-NUMBER | *** Assignment: EC-NUMBER | ||
** Source: [[orthology-ectocarpus_siliculosus]] | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
− | |||
− | |||
− | |||
== Pathways == | == Pathways == | ||
* [[LCYSDEG-PWY]], L-cysteine degradation II: [http://metacyc.org/META/NEW-IMAGE?object=LCYSDEG-PWY LCYSDEG-PWY] | * [[LCYSDEG-PWY]], L-cysteine degradation II: [http://metacyc.org/META/NEW-IMAGE?object=LCYSDEG-PWY LCYSDEG-PWY] | ||
− | ** ''' | + | ** '''1''' reactions found over '''3''' reactions in the full pathway |
== Reconstruction information == | == Reconstruction information == | ||
* Category: [[orthology]] | * Category: [[orthology]] | ||
Line 37: | Line 37: | ||
*** Tool: [[pathwaytools]] | *** Tool: [[pathwaytools]] | ||
== External links == | == External links == | ||
+ | * RHEA: | ||
+ | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=43037 43037] | ||
{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
{{#set: common name=cystathionine gamma-lyase}} | {{#set: common name=cystathionine gamma-lyase}} | ||
{{#set: common name=L-cysteine desulfhydrase}} | {{#set: common name=L-cysteine desulfhydrase}} | ||
− | {{#set: gene associated=SJ05358|SJ20026 | + | {{#set: gene associated=SJ05357|SJ05358|SJ20026}} |
{{#set: in pathway=LCYSDEG-PWY}} | {{#set: in pathway=LCYSDEG-PWY}} | ||
{{#set: reconstruction category=orthology|annotation}} | {{#set: reconstruction category=orthology|annotation}} | ||
− | {{#set: reconstruction source= | + | {{#set: reconstruction source=annotation-saccharina_japonica_genome|orthology-ectocarpus_siliculosus}} |
{{#set: reconstruction tool=pantograph|pathwaytools}} | {{#set: reconstruction tool=pantograph|pathwaytools}} |
Latest revision as of 12:56, 10 January 2019
Contents
Reaction RXN-15129
- direction:
- LEFT-TO-RIGHT
- common name:
- cystathionine gamma-lyase
- L-cysteine desulfhydrase
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 CYS[c] => 1 HS[c] + 1 2-AMINOACRYLATE[c]
- With common name(s):
- 1 L-cysteine[c] => 1 hydrogen sulfide[c] + 1 2-aminoprop-2-enoate[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: SJ05357
- Source: annotation-saccharina_japonica_genome
- Assignment: GO-TERM
- Source: annotation-saccharina_japonica_genome
- Gene: SJ05358
- Source: annotation-saccharina_japonica_genome
- Assignment: GO-TERM
- Source: annotation-saccharina_japonica_genome
- Gene: SJ20026
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: orthology-ectocarpus_siliculosus
- Source: annotation-saccharina_japonica_genome
Pathways
- LCYSDEG-PWY, L-cysteine degradation II: LCYSDEG-PWY
- 1 reactions found over 3 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-ectocarpus_siliculosus
- Tool: pantograph
- Source: orthology-ectocarpus_siliculosus
- Category: annotation
- Source: annotation-saccharina_japonica_genome
- Tool: pathwaytools
- Source: annotation-saccharina_japonica_genome
External links
- RHEA: