Difference between revisions of "RXN-37"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-37 RXN-37] == * direction: ** LEFT-TO-RIGHT * common name: ** aldehyde dehydrogenase (NAD) ** 4...") |
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Line 3: | Line 3: | ||
* direction: | * direction: | ||
** LEFT-TO-RIGHT | ** LEFT-TO-RIGHT | ||
+ | * ec number: | ||
+ | ** [http://enzyme.expasy.org/EC/1.2.1.3 EC-1.2.1.3] | ||
* common name: | * common name: | ||
** aldehyde dehydrogenase (NAD) | ** aldehyde dehydrogenase (NAD) | ||
** 4-acetamidobutanal dehydrogenase | ** 4-acetamidobutanal dehydrogenase | ||
− | |||
− | |||
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
− | ** 1 [[CPD-30]][c] '''+''' 1 [[ | + | ** 1 [[CPD-30]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[NAD]][c] '''=>''' 1 [[CPD-35]][c] '''+''' 1 [[NADH]][c] '''+''' 2 [[PROTON]][c] |
* With common name(s): | * With common name(s): | ||
− | ** 1 4-acetamidobutanal[c] '''+''' 1 | + | ** 1 4-acetamidobutanal[c] '''+''' 1 H2O[c] '''+''' 1 NAD+[c] '''=>''' 1 4-acetamidobutanoate[c] '''+''' 1 NADH[c] '''+''' 2 H+[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Genes have been associated with this reaction based on different elements listed below. | Genes have been associated with this reaction based on different elements listed below. | ||
− | * Gene: [[ | + | * Gene: [[SJ06047]] |
** Source: [[annotation-saccharina_japonica_genome]] | ** Source: [[annotation-saccharina_japonica_genome]] | ||
*** Assignment: GO-TERM | *** Assignment: GO-TERM | ||
Line 24: | Line 24: | ||
** Source: [[annotation-saccharina_japonica_genome]] | ** Source: [[annotation-saccharina_japonica_genome]] | ||
*** Assignment: GO-TERM | *** Assignment: GO-TERM | ||
− | * Gene: [[ | + | * Gene: [[SJ09287]] |
** Source: [[annotation-saccharina_japonica_genome]] | ** Source: [[annotation-saccharina_japonica_genome]] | ||
*** Assignment: GO-TERM | *** Assignment: GO-TERM | ||
− | * Gene: [[ | + | * Gene: [[SJ00435]] |
** Source: [[annotation-saccharina_japonica_genome]] | ** Source: [[annotation-saccharina_japonica_genome]] | ||
*** Assignment: GO-TERM | *** Assignment: GO-TERM | ||
Line 34: | Line 34: | ||
*** Assignment: GO-TERM | *** Assignment: GO-TERM | ||
** Source: [[orthology-arabidopsis_thaliana]] | ** Source: [[orthology-arabidopsis_thaliana]] | ||
− | * Gene: [[ | + | * Gene: [[SJ11330]] |
** Source: [[annotation-saccharina_japonica_genome]] | ** Source: [[annotation-saccharina_japonica_genome]] | ||
*** Assignment: GO-TERM | *** Assignment: GO-TERM | ||
− | * Gene: [[ | + | * Gene: [[SJ06359]] |
** Source: [[annotation-saccharina_japonica_genome]] | ** Source: [[annotation-saccharina_japonica_genome]] | ||
*** Assignment: GO-TERM | *** Assignment: GO-TERM | ||
− | + | * Gene: [[SJ06456]] | |
− | * Gene: [[ | + | |
** Source: [[annotation-saccharina_japonica_genome]] | ** Source: [[annotation-saccharina_japonica_genome]] | ||
*** Assignment: EC-NUMBER | *** Assignment: EC-NUMBER | ||
− | |||
** Source: [[orthology-arabidopsis_thaliana]] | ** Source: [[orthology-arabidopsis_thaliana]] | ||
− | * Gene: [[ | + | ** Source: [[orthology-ectocarpus_siliculosus]] |
+ | * Gene: [[SJ11331]] | ||
** Source: [[annotation-saccharina_japonica_genome]] | ** Source: [[annotation-saccharina_japonica_genome]] | ||
*** Assignment: GO-TERM | *** Assignment: GO-TERM | ||
− | * Gene: [[ | + | ** Source: [[orthology-arabidopsis_thaliana]] |
+ | * Gene: [[SJ10107]] | ||
** Source: [[annotation-saccharina_japonica_genome]] | ** Source: [[annotation-saccharina_japonica_genome]] | ||
*** Assignment: GO-TERM | *** Assignment: GO-TERM | ||
− | * Gene: [[ | + | * Gene: [[SJ06470]] |
− | + | ||
− | + | ||
− | + | ||
** Source: [[annotation-saccharina_japonica_genome]] | ** Source: [[annotation-saccharina_japonica_genome]] | ||
*** Assignment: EC-NUMBER | *** Assignment: EC-NUMBER | ||
− | |||
** Source: [[orthology-arabidopsis_thaliana]] | ** Source: [[orthology-arabidopsis_thaliana]] | ||
+ | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
+ | * Gene: [[SJ22552]] | ||
+ | ** Source: [[annotation-saccharina_japonica_genome]] | ||
+ | *** Assignment: GO-TERM | ||
== Pathways == | == Pathways == | ||
* [[PWY-0]], putrescine degradation III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-0 PWY-0] | * [[PWY-0]], putrescine degradation III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-0 PWY-0] | ||
Line 74: | Line 74: | ||
== External links == | == External links == | ||
* RHEA: | * RHEA: | ||
− | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id= | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=31232 31232] |
* LIGAND-RXN: | * LIGAND-RXN: | ||
** [http://www.genome.jp/dbget-bin/www_bget?R05050 R05050] | ** [http://www.genome.jp/dbget-bin/www_bget?R05050 R05050] | ||
{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
+ | {{#set: ec number=EC-1.2.1.3}} | ||
{{#set: common name=aldehyde dehydrogenase (NAD)}} | {{#set: common name=aldehyde dehydrogenase (NAD)}} | ||
{{#set: common name=4-acetamidobutanal dehydrogenase}} | {{#set: common name=4-acetamidobutanal dehydrogenase}} | ||
− | + | {{#set: gene associated=SJ06047|SJ17249|SJ09287|SJ00435|SJ05897|SJ11330|SJ06359|SJ06456|SJ11331|SJ10107|SJ06470|SJ22552}} | |
− | {{#set: gene associated= | + | |
{{#set: in pathway=PWY-0}} | {{#set: in pathway=PWY-0}} | ||
{{#set: reconstruction category=orthology|annotation}} | {{#set: reconstruction category=orthology|annotation}} | ||
{{#set: reconstruction source=orthology-arabidopsis_thaliana|orthology-ectocarpus_siliculosus|annotation-saccharina_japonica_genome}} | {{#set: reconstruction source=orthology-arabidopsis_thaliana|orthology-ectocarpus_siliculosus|annotation-saccharina_japonica_genome}} | ||
{{#set: reconstruction tool=pantograph|pathwaytools}} | {{#set: reconstruction tool=pantograph|pathwaytools}} |
Latest revision as of 13:07, 10 January 2019
Contents
Reaction RXN-37
- direction:
- LEFT-TO-RIGHT
- ec number:
- common name:
- aldehyde dehydrogenase (NAD)
- 4-acetamidobutanal dehydrogenase
- Synonym(s):
Reaction Formula
- With identifiers:
- With common name(s):
- 1 4-acetamidobutanal[c] + 1 H2O[c] + 1 NAD+[c] => 1 4-acetamidobutanoate[c] + 1 NADH[c] + 2 H+[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: SJ06047
- Source: annotation-saccharina_japonica_genome
- Assignment: GO-TERM
- Source: annotation-saccharina_japonica_genome
- Gene: SJ17249
- Source: annotation-saccharina_japonica_genome
- Assignment: GO-TERM
- Source: annotation-saccharina_japonica_genome
- Gene: SJ09287
- Source: annotation-saccharina_japonica_genome
- Assignment: GO-TERM
- Source: annotation-saccharina_japonica_genome
- Gene: SJ00435
- Source: annotation-saccharina_japonica_genome
- Assignment: GO-TERM
- Source: annotation-saccharina_japonica_genome
- Gene: SJ05897
- Source: annotation-saccharina_japonica_genome
- Assignment: GO-TERM
- Source: orthology-arabidopsis_thaliana
- Source: annotation-saccharina_japonica_genome
- Gene: SJ11330
- Source: annotation-saccharina_japonica_genome
- Assignment: GO-TERM
- Source: annotation-saccharina_japonica_genome
- Gene: SJ06359
- Source: annotation-saccharina_japonica_genome
- Assignment: GO-TERM
- Source: annotation-saccharina_japonica_genome
- Gene: SJ06456
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: orthology-arabidopsis_thaliana
- Source: orthology-ectocarpus_siliculosus
- Source: annotation-saccharina_japonica_genome
- Gene: SJ11331
- Source: annotation-saccharina_japonica_genome
- Assignment: GO-TERM
- Source: orthology-arabidopsis_thaliana
- Source: annotation-saccharina_japonica_genome
- Gene: SJ10107
- Source: annotation-saccharina_japonica_genome
- Assignment: GO-TERM
- Source: annotation-saccharina_japonica_genome
- Gene: SJ06470
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: orthology-arabidopsis_thaliana
- Source: orthology-ectocarpus_siliculosus
- Source: annotation-saccharina_japonica_genome
- Gene: SJ22552
- Source: annotation-saccharina_japonica_genome
- Assignment: GO-TERM
- Source: annotation-saccharina_japonica_genome
Pathways
Reconstruction information
- Category: orthology
- Source: orthology-arabidopsis_thaliana
- Tool: pantograph
- Source: orthology-ectocarpus_siliculosus
- Tool: pantograph
- Source: orthology-arabidopsis_thaliana
- Category: annotation
- Source: annotation-saccharina_japonica_genome
- Tool: pathwaytools
- Source: annotation-saccharina_japonica_genome
External links