Difference between revisions of "RXN-10707"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10707 RXN-10707] == * direction: ** LEFT-TO-RIGHT * common name: ** fatty-acyl coenzyme A oxida...") |
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| Line 3: | Line 3: | ||
* direction: | * direction: | ||
** LEFT-TO-RIGHT | ** LEFT-TO-RIGHT | ||
| + | * ec number: | ||
| + | ** [http://enzyme.expasy.org/EC/1.3.3.6 EC-1.3.3.6] | ||
* common name: | * common name: | ||
** fatty-acyl coenzyme A oxidase | ** fatty-acyl coenzyme A oxidase | ||
** acyl-CoA oxidase | ** acyl-CoA oxidase | ||
| − | |||
| − | |||
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
| − | ** 1 [[CPD-11525]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[ | + | ** 1 [[CPD-11525]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[CPD-11526]][c] '''+''' 1 [[HYDROGEN-PEROXIDE]][c] |
* With common name(s): | * With common name(s): | ||
| − | ** 1 | + | ** 1 3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-butanoyl-CoA[c] '''+''' 1 oxygen[c] '''=>''' 1 3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-buta-2-enoyl)-CoA[c] '''+''' 1 hydrogen peroxide[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Genes have been associated with this reaction based on different elements listed below. | Genes have been associated with this reaction based on different elements listed below. | ||
| − | * Gene: [[ | + | * Gene: [[SJ13468]] |
** Source: [[annotation-saccharina_japonica_genome]] | ** Source: [[annotation-saccharina_japonica_genome]] | ||
*** Assignment: EC-NUMBER | *** Assignment: EC-NUMBER | ||
| + | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
| + | * Gene: [[SJ19669]] | ||
| + | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
* Gene: [[SJ07451]] | * Gene: [[SJ07451]] | ||
** Source: [[annotation-saccharina_japonica_genome]] | ** Source: [[annotation-saccharina_japonica_genome]] | ||
*** Assignment: EC-NUMBER | *** Assignment: EC-NUMBER | ||
** Source: [[orthology-ectocarpus_siliculosus]] | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
| − | * Gene: [[ | + | * Gene: [[SJ03090]] |
** Source: [[annotation-saccharina_japonica_genome]] | ** Source: [[annotation-saccharina_japonica_genome]] | ||
*** Assignment: EC-NUMBER | *** Assignment: EC-NUMBER | ||
| − | |||
* Gene: [[SJ07452]] | * Gene: [[SJ07452]] | ||
** Source: [[annotation-saccharina_japonica_genome]] | ** Source: [[annotation-saccharina_japonica_genome]] | ||
*** Assignment: GO-TERM | *** Assignment: GO-TERM | ||
| − | |||
| − | |||
== Pathways == | == Pathways == | ||
* [[PWY-735]], jasmonic acid biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-735 PWY-735] | * [[PWY-735]], jasmonic acid biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-735 PWY-735] | ||
| Line 46: | Line 46: | ||
== External links == | == External links == | ||
{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
| + | {{#set: ec number=EC-1.3.3.6}} | ||
{{#set: common name=fatty-acyl coenzyme A oxidase}} | {{#set: common name=fatty-acyl coenzyme A oxidase}} | ||
{{#set: common name=acyl-CoA oxidase}} | {{#set: common name=acyl-CoA oxidase}} | ||
| − | + | {{#set: gene associated=SJ13468|SJ19669|SJ07451|SJ03090|SJ07452}} | |
| − | {{#set: gene associated= | + | |
{{#set: in pathway=PWY-735}} | {{#set: in pathway=PWY-735}} | ||
{{#set: reconstruction category=orthology|annotation}} | {{#set: reconstruction category=orthology|annotation}} | ||
{{#set: reconstruction source=orthology-ectocarpus_siliculosus|annotation-saccharina_japonica_genome}} | {{#set: reconstruction source=orthology-ectocarpus_siliculosus|annotation-saccharina_japonica_genome}} | ||
{{#set: reconstruction tool=pantograph|pathwaytools}} | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
Latest revision as of 13:08, 10 January 2019
Contents
Reaction RXN-10707
- direction:
- LEFT-TO-RIGHT
- ec number:
- common name:
- fatty-acyl coenzyme A oxidase
- acyl-CoA oxidase
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 CPD-11525[c] + 1 OXYGEN-MOLECULE[c] => 1 CPD-11526[c] + 1 HYDROGEN-PEROXIDE[c]
- With common name(s):
- 1 3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-butanoyl-CoA[c] + 1 oxygen[c] => 1 3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-buta-2-enoyl)-CoA[c] + 1 hydrogen peroxide[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: SJ13468
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: orthology-ectocarpus_siliculosus
- Source: annotation-saccharina_japonica_genome
- Gene: SJ19669
- Source: orthology-ectocarpus_siliculosus
- Gene: SJ07451
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: orthology-ectocarpus_siliculosus
- Source: annotation-saccharina_japonica_genome
- Gene: SJ03090
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: annotation-saccharina_japonica_genome
- Gene: SJ07452
- Source: annotation-saccharina_japonica_genome
- Assignment: GO-TERM
- Source: annotation-saccharina_japonica_genome
Pathways
- PWY-735, jasmonic acid biosynthesis: PWY-735
- 16 reactions found over 19 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-ectocarpus_siliculosus
- Tool: pantograph
- Source: orthology-ectocarpus_siliculosus
- Category: annotation
- Source: annotation-saccharina_japonica_genome
- Tool: pathwaytools
- Source: annotation-saccharina_japonica_genome
