Difference between revisions of "GLUTDEHYD-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLUTDEHYD-RXN GLUTDEHYD-RXN] == * direction: ** REVERSIBLE * common name: ** glutamate dehydrogenas...")
 
 
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* direction:
 
* direction:
 
** REVERSIBLE
 
** REVERSIBLE
−
* common name:
 
−
** glutamate dehydrogenase
 
 
* ec number:
 
* ec number:
 
** [http://enzyme.expasy.org/EC/1.4.1.4 EC-1.4.1.4]
 
** [http://enzyme.expasy.org/EC/1.4.1.4 EC-1.4.1.4]
 +
* common name:
 +
** glutamate dehydrogenase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[NADP]][c] '''+''' 1 [[GLT]][c] '''+''' 1 [[WATER]][c] '''<=>''' 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[AMMONIUM]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c]
+
** 1 [[GLT]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[NADP]][c] '''<=>''' 1 [[AMMONIUM]][c] '''+''' 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 NADP+[c] '''+''' 1 L-glutamate[c] '''+''' 1 H2O[c] '''<=>''' 1 2-oxoglutarate[c] '''+''' 1 ammonium[c] '''+''' 1 NADPH[c] '''+''' 1 H+[c]
+
** 1 L-glutamate[c] '''+''' 1 H2O[c] '''+''' 1 NADP+[c] '''<=>''' 1 ammonium[c] '''+''' 1 2-oxoglutarate[c] '''+''' 1 NADPH[c] '''+''' 1 H+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[SJ10813]]
+
* Gene: [[SJ10812]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
−
* Gene: [[SJ20190]]
+
* Gene: [[SJ10813]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
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*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
 
** Source: [[orthology-ectocarpus_siliculosus]]
 
** Source: [[orthology-ectocarpus_siliculosus]]
−
* Gene: [[SJ10812]]
+
* Gene: [[SJ20190]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
Line 35: Line 35:
 
** Source: [[orthology-ectocarpus_siliculosus]]
 
** Source: [[orthology-ectocarpus_siliculosus]]
 
== Pathways  ==
 
== Pathways  ==
 +
* [[PWY490-3]], nitrate reduction VI (assimilatory): [http://metacyc.org/META/NEW-IMAGE?object=PWY490-3 PWY490-3]
 +
** '''3''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-5675]], nitrate reduction V (assimilatory): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5675 PWY-5675]
 +
** '''4''' reactions found over '''4''' reactions in the full pathway
 
* [[GLUTSYNIII-PWY]], L-glutamate biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=GLUTSYNIII-PWY GLUTSYNIII-PWY]
 
* [[GLUTSYNIII-PWY]], L-glutamate biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=GLUTSYNIII-PWY GLUTSYNIII-PWY]
 
** '''1''' reactions found over '''1''' reactions in the full pathway
 
** '''1''' reactions found over '''1''' reactions in the full pathway
 
* [[PWY-5913]], partial TCA cycle (obligate autotrophs): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5913 PWY-5913]
 
* [[PWY-5913]], partial TCA cycle (obligate autotrophs): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5913 PWY-5913]
 
** '''10''' reactions found over '''11''' reactions in the full pathway
 
** '''10''' reactions found over '''11''' reactions in the full pathway
−
* [[PWY-5675]], nitrate reduction V (assimilatory): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5675 PWY-5675]
 
−
** '''4''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY490-3]], nitrate reduction VI (assimilatory): [http://metacyc.org/META/NEW-IMAGE?object=PWY490-3 PWY490-3]
 
−
** '''3''' reactions found over '''4''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
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== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11612 11612]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11615 11615]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
 
** [http://www.genome.jp/dbget-bin/www_bget?R00248 R00248]
 
** [http://www.genome.jp/dbget-bin/www_bget?R00248 R00248]
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** [http://www.uniprot.org/uniprot/P78804 P78804]
 
** [http://www.uniprot.org/uniprot/P78804 P78804]
 
{{#set: direction=REVERSIBLE}}
 
{{#set: direction=REVERSIBLE}}
−
{{#set: common name=glutamate dehydrogenase}}
 
 
{{#set: ec number=EC-1.4.1.4}}
 
{{#set: ec number=EC-1.4.1.4}}
−
{{#set: gene associated=SJ10813|SJ20190|SJ10621|SJ10812|SJ20174}}
+
{{#set: common name=glutamate dehydrogenase}}
−
{{#set: in pathway=GLUTSYNIII-PWY|PWY-5913|PWY-5675|PWY490-3}}
+
{{#set: gene associated=SJ10812|SJ10813|SJ10621|SJ20190|SJ20174}}
 +
{{#set: in pathway=PWY490-3|PWY-5675|GLUTSYNIII-PWY|PWY-5913}}
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction source=orthology-ectocarpus_siliculosus|annotation-saccharina_japonica_genome}}
+
{{#set: reconstruction source=annotation-saccharina_japonica_genome|orthology-ectocarpus_siliculosus}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 13:15, 10 January 2019

Reaction GLUTDEHYD-RXN

  • direction:
    • REVERSIBLE
  • ec number:
  • common name:
    • glutamate dehydrogenase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 L-glutamate[c] + 1 H2O[c] + 1 NADP+[c] <=> 1 ammonium[c] + 1 2-oxoglutarate[c] + 1 NADPH[c] + 1 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY490-3, nitrate reduction VI (assimilatory): PWY490-3
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-5675, nitrate reduction V (assimilatory): PWY-5675
    • 4 reactions found over 4 reactions in the full pathway
  • GLUTSYNIII-PWY, L-glutamate biosynthesis III: GLUTSYNIII-PWY
    • 1 reactions found over 1 reactions in the full pathway
  • PWY-5913, partial TCA cycle (obligate autotrophs): PWY-5913
    • 10 reactions found over 11 reactions in the full pathway

Reconstruction information

External links





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