Difference between revisions of "RXN-4209"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-4209 RXN-4209] == * direction: ** LEFT-TO-RIGHT * common name: ** avenasterol-desaturase * ec n...") |
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* direction: | * direction: | ||
** LEFT-TO-RIGHT | ** LEFT-TO-RIGHT | ||
− | |||
− | |||
* ec number: | * ec number: | ||
** [http://enzyme.expasy.org/EC/1.14.19.20 EC-1.14.19.20] | ** [http://enzyme.expasy.org/EC/1.14.19.20 EC-1.14.19.20] | ||
+ | * common name: | ||
+ | ** avenasterol-desaturase | ||
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
− | ** | + | ** 1 [[CPD-4125]][c] '''+''' 2 [[FERROCYTOCHROME-B5]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 2 [[PROTON]][c] '''=>''' 1 [[CPD-4126]][c] '''+''' 2 [[FERRICYTOCHROME-B5]][c] '''+''' 2 [[WATER]][c] |
* With common name(s): | * With common name(s): | ||
− | ** | + | ** 1 avenasterol[c] '''+''' 2 a ferrocytochrome b5[c] '''+''' 1 oxygen[c] '''+''' 2 H+[c] '''=>''' 1 5-dehydroavenasterol[c] '''+''' 2 a ferricytochrome b5[c] '''+''' 2 H2O[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
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** Source: [[annotation-saccharina_japonica_genome]] | ** Source: [[annotation-saccharina_japonica_genome]] | ||
*** Assignment: EC-NUMBER | *** Assignment: EC-NUMBER | ||
− | |||
** Source: [[orthology-arabidopsis_thaliana]] | ** Source: [[orthology-arabidopsis_thaliana]] | ||
+ | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
== Pathways == | == Pathways == | ||
* [[PWY-2541]], plant sterol biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2541 PWY-2541] | * [[PWY-2541]], plant sterol biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2541 PWY-2541] | ||
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** [http://www.genome.jp/dbget-bin/www_bget?R07486 R07486] | ** [http://www.genome.jp/dbget-bin/www_bget?R07486 R07486] | ||
{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
− | |||
{{#set: ec number=EC-1.14.19.20}} | {{#set: ec number=EC-1.14.19.20}} | ||
+ | {{#set: common name=avenasterol-desaturase}} | ||
{{#set: gene associated=SJ00834|SJ11625}} | {{#set: gene associated=SJ00834|SJ11625}} | ||
{{#set: in pathway=PWY-2541}} | {{#set: in pathway=PWY-2541}} |
Latest revision as of 13:16, 10 January 2019
Contents
[hide]Reaction RXN-4209
- direction:
- LEFT-TO-RIGHT
- ec number:
- common name:
- avenasterol-desaturase
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 CPD-4125[c] + 2 FERROCYTOCHROME-B5[c] + 1 OXYGEN-MOLECULE[c] + 2 PROTON[c] => 1 CPD-4126[c] + 2 FERRICYTOCHROME-B5[c] + 2 WATER[c]
- With common name(s):
- 1 avenasterol[c] + 2 a ferrocytochrome b5[c] + 1 oxygen[c] + 2 H+[c] => 1 5-dehydroavenasterol[c] + 2 a ferricytochrome b5[c] + 2 H2O[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: SJ00834
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: annotation-saccharina_japonica_genome
- Gene: SJ11625
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: orthology-arabidopsis_thaliana
- Source: orthology-ectocarpus_siliculosus
- Source: annotation-saccharina_japonica_genome
Pathways
- PWY-2541, plant sterol biosynthesis: PWY-2541
- 11 reactions found over 36 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-arabidopsis_thaliana
- Tool: pantograph
- Source: orthology-ectocarpus_siliculosus
- Tool: pantograph
- Source: orthology-arabidopsis_thaliana
- Category: annotation
- Source: annotation-saccharina_japonica_genome
- Tool: pathwaytools
- Source: annotation-saccharina_japonica_genome
External links
- LIGAND-RXN: