Difference between revisions of "RXN-11501"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11501 RXN-11501] == * direction: ** LEFT-TO-RIGHT * common name: ** alpha-galactosidase * ec nu...") |
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| Line 3: | Line 3: | ||
* direction: | * direction: | ||
** LEFT-TO-RIGHT | ** LEFT-TO-RIGHT | ||
| − | |||
| − | |||
* ec number: | * ec number: | ||
** [http://enzyme.expasy.org/EC/3.2.1.22 EC-3.2.1.22] | ** [http://enzyme.expasy.org/EC/3.2.1.22 EC-3.2.1.22] | ||
| + | * common name: | ||
| + | ** alpha-galactosidase | ||
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
| − | ** 1 [[CPD-170]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[ | + | ** 1 [[CPD-170]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CPD-1099]][c] '''+''' 1 [[ALPHA-D-GALACTOSE]][c] |
* With common name(s): | * With common name(s): | ||
| − | ** 1 stachyose[c] '''+''' 1 H2O[c] '''=>''' 1 | + | ** 1 stachyose[c] '''+''' 1 H2O[c] '''=>''' 1 raffinose[c] '''+''' 1 α-D-galactose[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
| Line 19: | Line 19: | ||
* Gene: [[SJ02145]] | * Gene: [[SJ02145]] | ||
** Source: [[orthology-ectocarpus_siliculosus]] | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
| − | * Gene: [[ | + | * Gene: [[SJ02144]] |
** Source: [[annotation-saccharina_japonica_genome]] | ** Source: [[annotation-saccharina_japonica_genome]] | ||
*** Assignment: GO-TERM | *** Assignment: GO-TERM | ||
| − | + | * Gene: [[SJ05258]] | |
| − | * Gene: [[ | + | |
** Source: [[annotation-saccharina_japonica_genome]] | ** Source: [[annotation-saccharina_japonica_genome]] | ||
*** Assignment: GO-TERM | *** Assignment: GO-TERM | ||
| + | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
== Pathways == | == Pathways == | ||
* [[PWY-6527]], stachyose degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6527 PWY-6527] | * [[PWY-6527]], stachyose degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6527 PWY-6527] | ||
| Line 40: | Line 40: | ||
** [http://www.genome.jp/dbget-bin/www_bget?R03634 R03634] | ** [http://www.genome.jp/dbget-bin/www_bget?R03634 R03634] | ||
{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
| − | |||
{{#set: ec number=EC-3.2.1.22}} | {{#set: ec number=EC-3.2.1.22}} | ||
| − | {{#set: gene associated=SJ02145 | + | {{#set: common name=alpha-galactosidase}} |
| + | {{#set: gene associated=SJ02145|SJ02144|SJ05258}} | ||
{{#set: in pathway=PWY-6527}} | {{#set: in pathway=PWY-6527}} | ||
{{#set: reconstruction category=orthology|annotation}} | {{#set: reconstruction category=orthology|annotation}} | ||
| − | {{#set: reconstruction source= | + | {{#set: reconstruction source=annotation-saccharina_japonica_genome|orthology-ectocarpus_siliculosus}} |
{{#set: reconstruction tool=pantograph|pathwaytools}} | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
Latest revision as of 14:20, 10 January 2019
Contents
Reaction RXN-11501
- direction:
- LEFT-TO-RIGHT
- ec number:
- common name:
- alpha-galactosidase
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 CPD-170[c] + 1 WATER[c] => 1 CPD-1099[c] + 1 ALPHA-D-GALACTOSE[c]
- With common name(s):
- 1 stachyose[c] + 1 H2O[c] => 1 raffinose[c] + 1 α-D-galactose[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: SJ02145
- Source: orthology-ectocarpus_siliculosus
- Gene: SJ02144
- Source: annotation-saccharina_japonica_genome
- Assignment: GO-TERM
- Source: annotation-saccharina_japonica_genome
- Gene: SJ05258
- Source: annotation-saccharina_japonica_genome
- Assignment: GO-TERM
- Source: orthology-ectocarpus_siliculosus
- Source: annotation-saccharina_japonica_genome
Pathways
Reconstruction information
- Category: orthology
- Source: orthology-ectocarpus_siliculosus
- Tool: pantograph
- Source: orthology-ectocarpus_siliculosus
- Category: annotation
- Source: annotation-saccharina_japonica_genome
- Tool: pathwaytools
- Source: annotation-saccharina_japonica_genome
External links
- LIGAND-RXN:
