Difference between revisions of "IMP-DEHYDROG-RXN"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=IMP-DEHYDROG-RXN IMP-DEHYDROG-RXN] == * direction: ** REVERSIBLE * common name: ** IMP dehydrogenas...")
 
 
Line 3: Line 3:
 
* direction:
 
* direction:
 
** REVERSIBLE
 
** REVERSIBLE
−
* common name:
 
−
** IMP dehydrogenase
 
 
* ec number:
 
* ec number:
 
** [http://enzyme.expasy.org/EC/1.1.1.205 EC-1.1.1.205]
 
** [http://enzyme.expasy.org/EC/1.1.1.205 EC-1.1.1.205]
 +
* common name:
 +
** IMP dehydrogenase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[IMP]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[NAD]][c] '''<=>''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[XANTHOSINE-5-PHOSPHATE]][c]
+
** 1 [[IMP]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[NAD]][c] '''<=>''' 1 [[XANTHOSINE-5-PHOSPHATE]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 IMP[c] '''+''' 1 H2O[c] '''+''' 1 NAD+[c] '''<=>''' 1 NADH[c] '''+''' 1 H+[c] '''+''' 1 XMP[c]
+
** 1 IMP[c] '''+''' 1 H2O[c] '''+''' 1 NAD+[c] '''<=>''' 1 XMP[c] '''+''' 1 NADH[c] '''+''' 1 H+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[SJ22514]]
+
* Gene: [[SJ08176]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
−
** Source: [[orthology-ectocarpus_siliculosus]]
 
−
** Source: [[orthology-nannochloropsis_salina]]
 
−
** Source: [[orthology-nannochloropsis_salina]]
 
−
** Source: [[orthology-arabidopsis_thaliana]]
 
 
* Gene: [[SJ21569]]
 
* Gene: [[SJ21569]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
−
* Gene: [[SJ08176]]
+
* Gene: [[SJ22514]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-nannochloropsis_salina]]
 +
** Source: [[orthology-nannochloropsis_salina]]
 +
** Source: [[orthology-arabidopsis_thaliana]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 
== Pathways  ==
 
== Pathways  ==
 
* [[PWY-7221]], guanosine ribonucleotides de novo biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7221 PWY-7221]
 
* [[PWY-7221]], guanosine ribonucleotides de novo biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7221 PWY-7221]
−
** '''4''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-5695]], urate biosynthesis/inosine 5'-phosphate degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5695 PWY-5695]
 
 
** '''4''' reactions found over '''4''' reactions in the full pathway
 
** '''4''' reactions found over '''4''' reactions in the full pathway
 
* [[PWY-6596]], adenosine nucleotides degradation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6596 PWY-6596]
 
* [[PWY-6596]], adenosine nucleotides degradation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6596 PWY-6596]
 
** '''7''' reactions found over '''8''' reactions in the full pathway
 
** '''7''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY-5695]], inosine 5'-phosphate degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5695 PWY-5695]
 +
** '''4''' reactions found over '''4''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
 
** Source: [[orthology-arabidopsis_thaliana]]
 
** Source: [[orthology-arabidopsis_thaliana]]
−
*** Tool: [[pantograph]]
 
−
** Source: [[orthology-ectocarpus_siliculosus]]
 
 
*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
 
** Source: [[orthology-nannochloropsis_salina]]
 
** Source: [[orthology-nannochloropsis_salina]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 
*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
 
* Category: [[annotation]]
 
* Category: [[annotation]]
Line 50: Line 50:
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11708 11708]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11711 11711]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
 
** [http://www.genome.jp/dbget-bin/www_bget?R01130 R01130]
 
** [http://www.genome.jp/dbget-bin/www_bget?R01130 R01130]
Line 98: Line 98:
 
** [http://www.uniprot.org/uniprot/O32912 O32912]
 
** [http://www.uniprot.org/uniprot/O32912 O32912]
 
{{#set: direction=REVERSIBLE}}
 
{{#set: direction=REVERSIBLE}}
−
{{#set: common name=IMP dehydrogenase}}
 
 
{{#set: ec number=EC-1.1.1.205}}
 
{{#set: ec number=EC-1.1.1.205}}
−
{{#set: gene associated=SJ22514|SJ21569|SJ08176}}
+
{{#set: common name=IMP dehydrogenase}}
−
{{#set: in pathway=PWY-7221|PWY-5695|PWY-6596}}
+
{{#set: gene associated=SJ08176|SJ21569|SJ22514}}
 +
{{#set: in pathway=PWY-7221|PWY-6596|PWY-5695}}
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction source=orthology-arabidopsis_thaliana|orthology-ectocarpus_siliculosus|orthology-nannochloropsis_salina|annotation-saccharina_japonica_genome}}
+
{{#set: reconstruction source=orthology-arabidopsis_thaliana|annotation-saccharina_japonica_genome|orthology-nannochloropsis_salina|orthology-ectocarpus_siliculosus}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 13:27, 10 January 2019

Reaction IMP-DEHYDROG-RXN

  • direction:
    • REVERSIBLE
  • ec number:
  • common name:
    • IMP dehydrogenase
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7221, guanosine ribonucleotides de novo biosynthesis: PWY-7221
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-6596, adenosine nucleotides degradation I: PWY-6596
    • 7 reactions found over 8 reactions in the full pathway
  • PWY-5695, inosine 5'-phosphate degradation: PWY-5695
    • 4 reactions found over 4 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/sjapgem/index.php?title=IMP-DEHYDROG-RXN&oldid=19024"