Difference between revisions of "2.5.1.32-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.5.1.32-RXN 2.5.1.32-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** prephytoene diphospha...")
 
 
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** Source: [[orthology-ectocarpus_siliculosus]]
 
** Source: [[orthology-ectocarpus_siliculosus]]
 
== Pathways  ==
 
== Pathways  ==
 +
* [[PWY-7943]], lycopadiene biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7943 PWY-7943]
 +
** '''1''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-6475]], trans-lycopene biosynthesis II (oxygenic phototrophs and green sulfur bacteria): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6475 PWY-6475]
 +
** '''8''' reactions found over '''8''' reactions in the full pathway
 
* [[PWY-6287]], neurosporene biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6287 PWY-6287]
 
* [[PWY-6287]], neurosporene biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6287 PWY-6287]
 
** '''5''' reactions found over '''5''' reactions in the full pathway
 
** '''5''' reactions found over '''5''' reactions in the full pathway
−
* [[PWY-6475]], trans-lycopene biosynthesis II (plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6475 PWY-6475]
 
−
** '''8''' reactions found over '''8''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
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== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22296 22296]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22297 22297]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
 
** [http://www.genome.jp/dbget-bin/www_bget?R02065 R02065]
 
** [http://www.genome.jp/dbget-bin/www_bget?R02065 R02065]
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{{#set: common name=PSase|geranylgeranyl-diphosphate geranylgeranyltransferase}}
 
{{#set: common name=PSase|geranylgeranyl-diphosphate geranylgeranyltransferase}}
 
{{#set: gene associated=SJ02885}}
 
{{#set: gene associated=SJ02885}}
−
{{#set: in pathway=PWY-6287|PWY-6475}}
+
{{#set: in pathway=PWY-7943|PWY-6475|PWY-6287}}
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction source=orthology-ectocarpus_siliculosus|annotation-saccharina_japonica_genome}}
 
{{#set: reconstruction source=orthology-ectocarpus_siliculosus|annotation-saccharina_japonica_genome}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 13:29, 10 January 2019

Reaction 2.5.1.32-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • prephytoene diphosphate synthase
  • Synonym(s):
    • PSase
    • geranylgeranyl-diphosphate geranylgeranyltransferase

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 2 geranylgeranyl diphosphate[c] => 1 prephytoene diphosphate[c] + 1 diphosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7943, lycopadiene biosynthesis: PWY-7943
    • 1 reactions found over 7 reactions in the full pathway
  • PWY-6475, trans-lycopene biosynthesis II (oxygenic phototrophs and green sulfur bacteria): PWY-6475
    • 8 reactions found over 8 reactions in the full pathway
  • PWY-6287, neurosporene biosynthesis: PWY-6287
    • 5 reactions found over 5 reactions in the full pathway

Reconstruction information

External links





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