Difference between revisions of "RXN-13616"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13616 RXN-13616] == * direction: ** LEFT-TO-RIGHT * common name: ** enoyl-CoA hydratase ** tran...")
 
 
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* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
−
* common name:
 
−
** enoyl-CoA hydratase
 
−
** trans-Δ2-decenoyl-CoA hydratase
 
 
* ec number:
 
* ec number:
 
** [http://enzyme.expasy.org/EC/4.2.1.17 EC-4.2.1.17]
 
** [http://enzyme.expasy.org/EC/4.2.1.17 EC-4.2.1.17]
 +
* common name:
 +
** trans-Δ2-decenoyl-CoA hydratase
 +
** enoyl-CoA hydratase
 
* Synonym(s):
 
* Synonym(s):
  
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** 1 [[T2-DECENOYL-COA]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CPD0-2244]][c]
 
** 1 [[T2-DECENOYL-COA]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CPD0-2244]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 trans-dec-2-enoyl-CoA[c] '''+''' 1 H2O[c] '''=>''' 1 (S)-3-hydroxydecanoyl-CoA[c]
+
** 1 (2E)-dec-2-enoyl-CoA[c] '''+''' 1 H2O[c] '''=>''' 1 (S)-3-hydroxydecanoyl-CoA[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[SJ03913]]
+
* Gene: [[SJ00040]]
−
** Source: [[annotation-saccharina_japonica_genome]]
+
** Source: [[orthology-nannochloropsis_salina]]
−
*** Assignment: EC-NUMBER
+
* Gene: [[SJ10275]]
 
** Source: [[orthology-ectocarpus_siliculosus]]
 
** Source: [[orthology-ectocarpus_siliculosus]]
 
* Gene: [[SJ21390]]
 
* Gene: [[SJ21390]]
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*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
 
** Source: [[orthology-ectocarpus_siliculosus]]
 
** Source: [[orthology-ectocarpus_siliculosus]]
−
* Gene: [[SJ00040]]
+
* Gene: [[SJ03913]]
−
** Source: [[orthology-nannochloropsis_salina]]
+
−
* Gene: [[SJ07211]]
+
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
 
** Source: [[orthology-ectocarpus_siliculosus]]
 
** Source: [[orthology-ectocarpus_siliculosus]]
−
* Gene: [[SJ14591]]
 
−
** Source: [[annotation-saccharina_japonica_genome]]
 
−
*** Assignment: GO-TERM
 
 
* Gene: [[SJ03584]]
 
* Gene: [[SJ03584]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
 
** Source: [[orthology-nannochloropsis_salina]]
 
** Source: [[orthology-nannochloropsis_salina]]
−
* Gene: [[SJ10275]]
+
* Gene: [[SJ14591]]
 +
** Source: [[annotation-saccharina_japonica_genome]]
 +
*** Assignment: GO-TERM
 +
* Gene: [[SJ07211]]
 +
** Source: [[annotation-saccharina_japonica_genome]]
 +
*** Assignment: EC-NUMBER
 
** Source: [[orthology-ectocarpus_siliculosus]]
 
** Source: [[orthology-ectocarpus_siliculosus]]
 
== Pathways  ==
 
== Pathways  ==
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== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
−
** Source: [[orthology-ectocarpus_siliculosus]]
 
−
*** Tool: [[pantograph]]
 
 
** Source: [[orthology-nannochloropsis_salina]]
 
** Source: [[orthology-nannochloropsis_salina]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 
*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
 
* Category: [[annotation]]
 
* Category: [[annotation]]
Line 59: Line 59:
 
** [http://www.genome.jp/dbget-bin/www_bget?R04744 R04744]
 
** [http://www.genome.jp/dbget-bin/www_bget?R04744 R04744]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=enoyl-CoA hydratase}}
 
−
{{#set: common name=trans-Δ2-decenoyl-CoA hydratase}}
 
 
{{#set: ec number=EC-4.2.1.17}}
 
{{#set: ec number=EC-4.2.1.17}}
−
{{#set: gene associated=SJ03913|SJ21390|SJ00040|SJ07211|SJ14591|SJ03584|SJ10275}}
+
{{#set: common name=trans-Δ2-decenoyl-CoA hydratase}}
 +
{{#set: common name=enoyl-CoA hydratase}}
 +
{{#set: gene associated=SJ00040|SJ10275|SJ21390|SJ03913|SJ03584|SJ14591|SJ07211}}
 
{{#set: in pathway=PWY-7094}}
 
{{#set: in pathway=PWY-7094}}
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction source=orthology-ectocarpus_siliculosus|orthology-nannochloropsis_salina|annotation-saccharina_japonica_genome}}
+
{{#set: reconstruction source=annotation-saccharina_japonica_genome|orthology-nannochloropsis_salina|orthology-ectocarpus_siliculosus}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 14:31, 10 January 2019

Reaction RXN-13616

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • common name:
    • trans-Δ2-decenoyl-CoA hydratase
    • enoyl-CoA hydratase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 (2E)-dec-2-enoyl-CoA[c] + 1 H2O[c] => 1 (S)-3-hydroxydecanoyl-CoA[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7094, fatty acid salvage: PWY-7094
    • 5 reactions found over 6 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/sjapgem/index.php?title=RXN-13616&oldid=19165"