Difference between revisions of "RXN-1225"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-1225 RXN-1225] == * direction: ** LEFT-TO-RIGHT * common name: ** digalactosyldiacylglycerol sy...") |
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| Line 3: | Line 3: | ||
* direction: | * direction: | ||
** LEFT-TO-RIGHT | ** LEFT-TO-RIGHT | ||
| − | |||
| − | |||
* ec number: | * ec number: | ||
** [http://enzyme.expasy.org/EC/2.4.1.241 EC-2.4.1.241] | ** [http://enzyme.expasy.org/EC/2.4.1.241 EC-2.4.1.241] | ||
| + | * common name: | ||
| + | ** digalactosyldiacylglycerol synthase | ||
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
| − | ** 1 [[CPD-14553]][c] '''+''' 1 [[D-Galactosyl-12-diacyl-glycerols]][c] '''=>''' 1 [[ | + | ** 1 [[CPD-14553]][c] '''+''' 1 [[D-Galactosyl-12-diacyl-glycerols]][c] '''=>''' 1 [[Galactosyl-galactosyl-diacyl-glycerols]][c] '''+''' 1 [[UDP]][c] '''+''' 1 [[PROTON]][c] |
* With common name(s): | * With common name(s): | ||
| − | ** 1 UDP-α-D-galactose[c] '''+''' 1 a 1,2-diacyl-3-O-(β-D-galactopyranosyl)-sn-glycerol[c] '''=>''' 1 | + | ** 1 UDP-α-D-galactose[c] '''+''' 1 a 1,2-diacyl-3-O-(β-D-galactopyranosyl)-sn-glycerol[c] '''=>''' 1 an α,β-digalactosyldiacylglycerol[c] '''+''' 1 UDP[c] '''+''' 1 H+[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Genes have been associated with this reaction based on different elements listed below. | Genes have been associated with this reaction based on different elements listed below. | ||
| + | * Gene: [[SJ13607]] | ||
| + | ** Source: [[annotation-saccharina_japonica_genome]] | ||
| + | *** Assignment: EC-NUMBER | ||
* Gene: [[SJ00988]] | * Gene: [[SJ00988]] | ||
** Source: [[annotation-saccharina_japonica_genome]] | ** Source: [[annotation-saccharina_japonica_genome]] | ||
*** Assignment: EC-NUMBER | *** Assignment: EC-NUMBER | ||
| − | * Gene: [[ | + | * Gene: [[SJ10017]] |
** Source: [[annotation-saccharina_japonica_genome]] | ** Source: [[annotation-saccharina_japonica_genome]] | ||
*** Assignment: EC-NUMBER | *** Assignment: EC-NUMBER | ||
** Source: [[orthology-ectocarpus_siliculosus]] | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
| − | * Gene: [[ | + | * Gene: [[SJ13608]] |
| − | + | ||
| − | + | ||
| − | + | ||
** Source: [[annotation-saccharina_japonica_genome]] | ** Source: [[annotation-saccharina_japonica_genome]] | ||
*** Assignment: EC-NUMBER | *** Assignment: EC-NUMBER | ||
| Line 45: | Line 45: | ||
== External links == | == External links == | ||
* RHEA: | * RHEA: | ||
| − | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id= | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10521 10521] |
* LIGAND-RXN: | * LIGAND-RXN: | ||
** [http://www.genome.jp/dbget-bin/www_bget?R04469 R04469] | ** [http://www.genome.jp/dbget-bin/www_bget?R04469 R04469] | ||
{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
| − | |||
{{#set: ec number=EC-2.4.1.241}} | {{#set: ec number=EC-2.4.1.241}} | ||
| − | {{#set: gene associated= | + | {{#set: common name=digalactosyldiacylglycerol synthase}} |
| + | {{#set: gene associated=SJ13607|SJ00988|SJ10017|SJ13608}} | ||
{{#set: in pathway=PWY-401|PWY-7666}} | {{#set: in pathway=PWY-401|PWY-7666}} | ||
{{#set: reconstruction category=orthology|annotation}} | {{#set: reconstruction category=orthology|annotation}} | ||
{{#set: reconstruction source=orthology-ectocarpus_siliculosus|annotation-saccharina_japonica_genome}} | {{#set: reconstruction source=orthology-ectocarpus_siliculosus|annotation-saccharina_japonica_genome}} | ||
{{#set: reconstruction tool=pantograph|pathwaytools}} | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
Latest revision as of 13:32, 10 January 2019
Contents
Reaction RXN-1225
- direction:
- LEFT-TO-RIGHT
- ec number:
- common name:
- digalactosyldiacylglycerol synthase
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 CPD-14553[c] + 1 D-Galactosyl-12-diacyl-glycerols[c] => 1 Galactosyl-galactosyl-diacyl-glycerols[c] + 1 UDP[c] + 1 PROTON[c]
- With common name(s):
- 1 UDP-α-D-galactose[c] + 1 a 1,2-diacyl-3-O-(β-D-galactopyranosyl)-sn-glycerol[c] => 1 an α,β-digalactosyldiacylglycerol[c] + 1 UDP[c] + 1 H+[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: SJ13607
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: annotation-saccharina_japonica_genome
- Gene: SJ00988
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: annotation-saccharina_japonica_genome
- Gene: SJ10017
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: orthology-ectocarpus_siliculosus
- Source: annotation-saccharina_japonica_genome
- Gene: SJ13608
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: orthology-ectocarpus_siliculosus
- Source: annotation-saccharina_japonica_genome
Pathways
- PWY-401, galactolipid biosynthesis I: PWY-401
- 2 reactions found over 5 reactions in the full pathway
- PWY-7666, galactolipid biosynthesis II: PWY-7666
- 1 reactions found over 3 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-ectocarpus_siliculosus
- Tool: pantograph
- Source: orthology-ectocarpus_siliculosus
- Category: annotation
- Source: annotation-saccharina_japonica_genome
- Tool: pathwaytools
- Source: annotation-saccharina_japonica_genome
External links
