Difference between revisions of "ARGININE--TRNA-LIGASE-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ARGININE--TRNA-LIGASE-RXN ARGININE--TRNA-LIGASE-RXN] == * direction: ** LEFT-TO-RIGHT * common name...")
 
 
Line 3: Line 3:
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
−
* common name:
 
−
** arginine-tRNA ligase
 
 
* ec number:
 
* ec number:
 
** [http://enzyme.expasy.org/EC/6.1.1.19 EC-6.1.1.19]
 
** [http://enzyme.expasy.org/EC/6.1.1.19 EC-6.1.1.19]
 +
* common name:
 +
** arginine-tRNA ligase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[ARG]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[ARG-tRNAs]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[Charged-ARG-tRNAs]][c]
+
** 1 [[ARG-tRNAs]][c] '''+''' 1 [[ARG]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[Charged-ARG-tRNAs]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[AMP]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 L-arginine[c] '''+''' 1 ATP[c] '''+''' 1 a tRNAarg[c] '''=>''' 1 AMP[c] '''+''' 1 diphosphate[c] '''+''' 1 an L-arginyl-[tRNAarg][c]
+
** 1 a tRNAArg[c] '''+''' 1 L-arginine[c] '''+''' 1 ATP[c] '''=>''' 1 an L-arginyl-[tRNAArg][c] '''+''' 1 diphosphate[c] '''+''' 1 AMP[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[SJ13753]]
 
−
** Source: [[annotation-saccharina_japonica_genome]]
 
−
*** Assignment: GO-TERM
 
 
* Gene: [[SJ05085]]
 
* Gene: [[SJ05085]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
Line 28: Line 25:
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
 
** Source: [[orthology-ectocarpus_siliculosus]]
 
** Source: [[orthology-ectocarpus_siliculosus]]
 +
* Gene: [[SJ13753]]
 +
** Source: [[annotation-saccharina_japonica_genome]]
 +
*** Assignment: GO-TERM
 
== Pathways  ==
 
== Pathways  ==
 
* [[TRNA-CHARGING-PWY]], tRNA charging: [http://metacyc.org/META/NEW-IMAGE?object=TRNA-CHARGING-PWY TRNA-CHARGING-PWY]
 
* [[TRNA-CHARGING-PWY]], tRNA charging: [http://metacyc.org/META/NEW-IMAGE?object=TRNA-CHARGING-PWY TRNA-CHARGING-PWY]
Line 40: Line 40:
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20301 20301]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20302 20302]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
 
** [http://www.genome.jp/dbget-bin/www_bget?R03646 R03646]
 
** [http://www.genome.jp/dbget-bin/www_bget?R03646 R03646]
Line 71: Line 71:
 
** [http://www.uniprot.org/uniprot/O74781 O74781]
 
** [http://www.uniprot.org/uniprot/O74781 O74781]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=arginine-tRNA ligase}}
 
 
{{#set: ec number=EC-6.1.1.19}}
 
{{#set: ec number=EC-6.1.1.19}}
−
{{#set: gene associated=SJ13753|SJ05085|SJ11647}}
+
{{#set: common name=arginine-tRNA ligase}}
 +
{{#set: gene associated=SJ05085|SJ11647|SJ13753}}
 
{{#set: in pathway=TRNA-CHARGING-PWY}}
 
{{#set: in pathway=TRNA-CHARGING-PWY}}
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction source=orthology-ectocarpus_siliculosus|annotation-saccharina_japonica_genome}}
 
{{#set: reconstruction source=orthology-ectocarpus_siliculosus|annotation-saccharina_japonica_genome}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 14:37, 10 January 2019

Reaction ARGININE--TRNA-LIGASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • common name:
    • arginine-tRNA ligase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 a tRNAArg[c] + 1 L-arginine[c] + 1 ATP[c] => 1 an L-arginyl-[tRNAArg][c] + 1 diphosphate[c] + 1 AMP[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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