Difference between revisions of "2-ISOPROPYLMALATESYN-RXN"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2-ISOPROPYLMALATESYN-RXN 2-ISOPROPYLMALATESYN-RXN] == * direction: ** LEFT-TO-RIGHT * common name:...")
 
 
Line 3: Line 3:
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
−
* common name:
 
−
** 2-isopropylmalate synthase
 
 
* ec number:
 
* ec number:
 
** [http://enzyme.expasy.org/EC/2.3.3.13 EC-2.3.3.13]
 
** [http://enzyme.expasy.org/EC/2.3.3.13 EC-2.3.3.13]
 +
* common name:
 +
** 2-isopropylmalate synthase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[ACETYL-COA]][c] '''+''' 1 [[2-KETO-ISOVALERATE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[3-CARBOXY-3-HYDROXY-ISOCAPROATE]][c]
+
** 1 [[ACETYL-COA]][c] '''+''' 1 [[2-KETO-ISOVALERATE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[3-CARBOXY-3-HYDROXY-ISOCAPROATE]][c] '''+''' 1 [[CO-A]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 acetyl-CoA[c] '''+''' 1 3-methyl-2-oxobutanoate[c] '''+''' 1 H2O[c] '''=>''' 1 H+[c] '''+''' 1 coenzyme A[c] '''+''' 1 (2S)-2-isopropylmalate[c]
+
** 1 acetyl-CoA[c] '''+''' 1 3-methyl-2-oxobutanoate[c] '''+''' 1 H2O[c] '''=>''' 1 H+[c] '''+''' 1 (2S)-2-isopropylmalate[c] '''+''' 1 coenzyme A[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
Line 20: Line 20:
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
−
** Source: [[orthology-ectocarpus_siliculosus]]
 
 
** Source: [[orthology-nannochloropsis_salina]]
 
** Source: [[orthology-nannochloropsis_salina]]
 
** Source: [[orthology-arabidopsis_thaliana]]
 
** Source: [[orthology-arabidopsis_thaliana]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 
== Pathways  ==
 
== Pathways  ==
 
* [[LEUSYN-PWY]], L-leucine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=LEUSYN-PWY LEUSYN-PWY]
 
* [[LEUSYN-PWY]], L-leucine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=LEUSYN-PWY LEUSYN-PWY]
−
** '''6''' reactions found over '''6''' reactions in the full pathway
+
** '''5''' reactions found over '''6''' reactions in the full pathway
 
* [[PWY-6871]], 3-methylbutanol biosynthesis (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6871 PWY-6871]
 
* [[PWY-6871]], 3-methylbutanol biosynthesis (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6871 PWY-6871]
−
** '''6''' reactions found over '''7''' reactions in the full pathway
+
** '''5''' reactions found over '''7''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
 
** Source: [[orthology-arabidopsis_thaliana]]
 
** Source: [[orthology-arabidopsis_thaliana]]
−
*** Tool: [[pantograph]]
 
−
** Source: [[orthology-ectocarpus_siliculosus]]
 
 
*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
 
** Source: [[orthology-nannochloropsis_salina]]
 
** Source: [[orthology-nannochloropsis_salina]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 
*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
 
* Category: [[annotation]]
 
* Category: [[annotation]]
Line 41: Line 41:
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21524 21524]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21525 21525]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
 
** [http://www.genome.jp/dbget-bin/www_bget?R01213 R01213]
 
** [http://www.genome.jp/dbget-bin/www_bget?R01213 R01213]
Line 57: Line 57:
 
** [http://www.uniprot.org/uniprot/O86511 O86511]
 
** [http://www.uniprot.org/uniprot/O86511 O86511]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=2-isopropylmalate synthase}}
 
 
{{#set: ec number=EC-2.3.3.13}}
 
{{#set: ec number=EC-2.3.3.13}}
 +
{{#set: common name=2-isopropylmalate synthase}}
 
{{#set: gene associated=SJ04717}}
 
{{#set: gene associated=SJ04717}}
 
{{#set: in pathway=LEUSYN-PWY|PWY-6871}}
 
{{#set: in pathway=LEUSYN-PWY|PWY-6871}}
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction source=orthology-arabidopsis_thaliana|orthology-ectocarpus_siliculosus|orthology-nannochloropsis_salina|annotation-saccharina_japonica_genome}}
+
{{#set: reconstruction source=orthology-arabidopsis_thaliana|annotation-saccharina_japonica_genome|orthology-nannochloropsis_salina|orthology-ectocarpus_siliculosus}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 13:38, 10 January 2019

Reaction 2-ISOPROPYLMALATESYN-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • common name:
    • 2-isopropylmalate synthase
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • LEUSYN-PWY, L-leucine biosynthesis: LEUSYN-PWY
    • 5 reactions found over 6 reactions in the full pathway
  • PWY-6871, 3-methylbutanol biosynthesis (engineered): PWY-6871
    • 5 reactions found over 7 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/sjapgem/index.php?title=2-ISOPROPYLMALATESYN-RXN&oldid=19394"