Difference between revisions of "RXN-10773"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10773 RXN-10773] == * direction: ** LEFT-TO-RIGHT * common name: ** cellobiose β-glucosida...")
 
 
Line 3: Line 3:
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/3.2.1.21 EC-3.2.1.21]
 
* common name:
 
* common name:
 
** cellobiose β-glucosidase
 
** cellobiose β-glucosidase
 
** beta-glucosidase
 
** beta-glucosidase
−
* ec number:
 
−
** [http://enzyme.expasy.org/EC/3.2.1.21 EC-3.2.1.21]
 
 
* Synonym(s):
 
* Synonym(s):
  
Line 18: Line 18:
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[SJ16402]]
+
* Gene: [[SJ00855]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
* Gene: [[SJ14193]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
* Gene: [[SJ05741]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ14973]]
+
* Gene: [[SJ18318]]
 +
** Source: [[annotation-saccharina_japonica_genome]]
 +
*** Assignment: GO-TERM
 +
* Gene: [[SJ05740]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
Line 28: Line 35:
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
 
** Source: [[orthology-ectocarpus_siliculosus]]
 
** Source: [[orthology-ectocarpus_siliculosus]]
−
* Gene: [[SJ19930]]
+
* Gene: [[SJ14973]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
−
*** Assignment: EC-NUMBER
+
*** Assignment: GO-TERM
−
** Source: [[orthology-ectocarpus_siliculosus]]
+
* Gene: [[SJ18897]]
−
* Gene: [[SJ14193]]
+
−
** Source: [[orthology-ectocarpus_siliculosus]]
+
−
* Gene: [[SJ05782]]
+
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ05532]]
+
* Gene: [[SJ11958]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ05741]]
+
* Gene: [[SJ05533]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ05257]]
+
* Gene: [[SJ19930]]
 +
** Source: [[annotation-saccharina_japonica_genome]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
* Gene: [[SJ16402]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ05533]]
+
* Gene: [[SJ05257]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ00855]]
+
* Gene: [[SJ05532]]
−
** Source: [[orthology-ectocarpus_siliculosus]]
+
−
* Gene: [[SJ18897]]
+
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
Line 57: Line 63:
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
−
* Gene: [[SJ11958]]
 
−
** Source: [[annotation-saccharina_japonica_genome]]
 
−
*** Assignment: GO-TERM
 
 
* Gene: [[SJ04558]]
 
* Gene: [[SJ04558]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
−
* Gene: [[SJ05740]]
+
* Gene: [[SJ05782]]
−
** Source: [[annotation-saccharina_japonica_genome]]
+
−
*** Assignment: GO-TERM
+
−
* Gene: [[SJ18318]]
+
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
Line 85: Line 85:
 
** [http://www.genome.jp/dbget-bin/www_bget?R00026 R00026]
 
** [http://www.genome.jp/dbget-bin/www_bget?R00026 R00026]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: ec number=EC-3.2.1.21}}
 
{{#set: common name=cellobiose β-glucosidase}}
 
{{#set: common name=cellobiose β-glucosidase}}
 
{{#set: common name=beta-glucosidase}}
 
{{#set: common name=beta-glucosidase}}
−
{{#set: ec number=EC-3.2.1.21}}
+
{{#set: gene associated=SJ00855|SJ14193|SJ05741|SJ18318|SJ05740|SJ17199|SJ14973|SJ18897|SJ11958|SJ05533|SJ19930|SJ16402|SJ05257|SJ05532|SJ04559|SJ04558|SJ05782}}
−
{{#set: gene associated=SJ16402|SJ14973|SJ17199|SJ19930|SJ14193|SJ05782|SJ05532|SJ05741|SJ05257|SJ05533|SJ00855|SJ18897|SJ04559|SJ11958|SJ04558|SJ05740|SJ18318}}
+
 
{{#set: in pathway=PWY-6788}}
 
{{#set: in pathway=PWY-6788}}
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction source=orthology-ectocarpus_siliculosus|annotation-saccharina_japonica_genome}}
+
{{#set: reconstruction source=annotation-saccharina_japonica_genome|orthology-ectocarpus_siliculosus}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 13:40, 10 January 2019

Reaction RXN-10773

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • common name:
    • cellobiose β-glucosidase
    • beta-glucosidase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 β-D-cellobiose[c] + 1 H2O[c] => 2 D-glucopyranose[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6788, cellulose degradation II (fungi): PWY-6788
    • 3 reactions found over 3 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/sjapgem/index.php?title=RXN-10773&oldid=19443"