Difference between revisions of "ACYLCOADEHYDROG-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ACYLCOADEHYDROG-RXN ACYLCOADEHYDROG-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** acyl-Co...")
 
 
Line 3: Line 3:
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
−
* common name:
 
−
** acyl-CoA dehydrogenase
 
 
* ec number:
 
* ec number:
 
** [http://enzyme.expasy.org/EC/1.3.8 EC-1.3.8]
 
** [http://enzyme.expasy.org/EC/1.3.8 EC-1.3.8]
 +
* common name:
 +
** acyl-CoA dehydrogenase
 
* Synonym(s):
 
* Synonym(s):
 
** fatty acyl coenzyme A dehydrogenase
 
** fatty acyl coenzyme A dehydrogenase
Line 18: Line 18:
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[PROTON]][c] '''+''' 1 [[Saturated-Fatty-Acyl-CoA]][c] '''+''' 1 [[ETF-Oxidized]][c] '''=>''' 1 [[TRANS-D2-ENOYL-COA]][c] '''+''' 1 [[ETF-Reduced]][c]
+
** 1 [[Saturated-Fatty-Acyl-CoA]][c] '''+''' 1 [[ETF-Oxidized]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[TRANS-D2-ENOYL-COA]][c] '''+''' 1 [[ETF-Reduced]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 H+[c] '''+''' 1 a 2,3,4-saturated fatty acyl CoA[c] '''+''' 1 an oxidized electron-transfer flavoprotein[c] '''=>''' 1 a trans-2-enoyl-CoA[c] '''+''' 1 a reduced electron-transfer flavoprotein[c]
+
** 1 a 2,3,4-saturated fatty acyl CoA[c] '''+''' 1 an oxidized electron-transfer flavoprotein[c] '''+''' 1 H+[c] '''=>''' 1 a (2E)-alkan-2-enoyl-CoA[c] '''+''' 1 a reduced electron-transfer flavoprotein[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[SJ06456]]
+
* Gene: [[SJ15262]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ01215]]
 
 
** Source: [[orthology-ectocarpus_siliculosus]]
 
** Source: [[orthology-ectocarpus_siliculosus]]
−
* Gene: [[SJ07452]]
+
* Gene: [[SJ13468]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ19669]]
+
* Gene: [[SJ07241]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
** Source: [[orthology-ectocarpus_siliculosus]]
+
* Gene: [[SJ21233]]
−
* Gene: [[SJ13468]]
+
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 
* Gene: [[SJ07909]]
 
* Gene: [[SJ07909]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ06470]]
+
* Gene: [[SJ07451]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
Line 48: Line 47:
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ15262]]
+
* Gene: [[SJ07452]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
** Source: [[orthology-ectocarpus_siliculosus]]
+
* Gene: [[SJ03090]]
−
* Gene: [[SJ04334]]
+
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
** Source: [[orthology-ectocarpus_siliculosus]]
+
* Gene: [[SJ19669]]
−
* Gene: [[SJ07451]]
+
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ21233]]
+
** Source: [[orthology-ectocarpus_siliculosus]]
 +
* Gene: [[SJ04334]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
 
** Source: [[orthology-ectocarpus_siliculosus]]
 
** Source: [[orthology-ectocarpus_siliculosus]]
−
* Gene: [[SJ03090]]
+
* Gene: [[SJ06456]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ07241]]
+
* Gene: [[SJ01215]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
* Gene: [[SJ06470]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
Line 80: Line 80:
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=44705 44705]
 
* UNIPROT:
 
* UNIPROT:
 
** [http://www.uniprot.org/uniprot/P16219 P16219]
 
** [http://www.uniprot.org/uniprot/P16219 P16219]
Line 93: Line 95:
 
** [http://www.uniprot.org/uniprot/Q96329 Q96329]
 
** [http://www.uniprot.org/uniprot/Q96329 Q96329]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=acyl-CoA dehydrogenase}}
 
 
{{#set: ec number=EC-1.3.8}}
 
{{#set: ec number=EC-1.3.8}}
 +
{{#set: common name=acyl-CoA dehydrogenase}}
 
{{#set: common name=fatty acyl coenzyme A dehydrogenase|acyl coenzyme A dehydrogenase|fatty-acyl-CoA dehydrogenase|general acyl CoA dehydrogenase|medium-chain acyl-coenzyme A dehydrogenase|long-chain acyl coenzyme A dehydrogenase|long-chain acyl-CoA dehydrogenase}}
 
{{#set: common name=fatty acyl coenzyme A dehydrogenase|acyl coenzyme A dehydrogenase|fatty-acyl-CoA dehydrogenase|general acyl CoA dehydrogenase|medium-chain acyl-coenzyme A dehydrogenase|long-chain acyl coenzyme A dehydrogenase|long-chain acyl-CoA dehydrogenase}}
−
{{#set: gene associated=SJ06456|SJ01215|SJ07452|SJ19669|SJ13468|SJ07909|SJ06470|SJ21703|SJ15262|SJ04334|SJ07451|SJ21233|SJ03090|SJ07241}}
+
{{#set: gene associated=SJ15262|SJ13468|SJ07241|SJ21233|SJ07909|SJ07451|SJ21703|SJ07452|SJ03090|SJ19669|SJ04334|SJ06456|SJ01215|SJ06470}}
 
{{#set: in pathway=FAO-PWY}}
 
{{#set: in pathway=FAO-PWY}}
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction source=orthology-ectocarpus_siliculosus|annotation-saccharina_japonica_genome}}
 
{{#set: reconstruction source=orthology-ectocarpus_siliculosus|annotation-saccharina_japonica_genome}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 13:43, 10 January 2019

Reaction ACYLCOADEHYDROG-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • common name:
    • acyl-CoA dehydrogenase
  • Synonym(s):
    • fatty acyl coenzyme A dehydrogenase
    • acyl coenzyme A dehydrogenase
    • fatty-acyl-CoA dehydrogenase
    • general acyl CoA dehydrogenase
    • medium-chain acyl-coenzyme A dehydrogenase
    • long-chain acyl coenzyme A dehydrogenase
    • long-chain acyl-CoA dehydrogenase

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • FAO-PWY, fatty acid β-oxidation I: FAO-PWY
    • 6 reactions found over 7 reactions in the full pathway

Reconstruction information

External links





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