Difference between revisions of "RXN-7913"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7913 RXN-7913] == * direction: ** LEFT-TO-RIGHT * common name: ** dCMP kinase * ec number: ** [...") |
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| Line 3: | Line 3: | ||
* direction: | * direction: | ||
** LEFT-TO-RIGHT | ** LEFT-TO-RIGHT | ||
| − | |||
| − | |||
* ec number: | * ec number: | ||
** [http://enzyme.expasy.org/EC/2.7.4.25 EC-2.7.4.25] | ** [http://enzyme.expasy.org/EC/2.7.4.25 EC-2.7.4.25] | ||
** [http://enzyme.expasy.org/EC/2.7.4.14 EC-2.7.4.14] | ** [http://enzyme.expasy.org/EC/2.7.4.14 EC-2.7.4.14] | ||
** [http://enzyme.expasy.org/EC/2.7.4.13 EC-2.7.4.13] | ** [http://enzyme.expasy.org/EC/2.7.4.13 EC-2.7.4.13] | ||
| + | * common name: | ||
| + | ** dCMP kinase | ||
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
| − | ** 1 [[ | + | ** 1 [[ATP]][c] '''+''' 1 [[DCMP]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[DCDP]][c] |
* With common name(s): | * With common name(s): | ||
| − | ** 1 | + | ** 1 ATP[c] '''+''' 1 dCMP[c] '''=>''' 1 ADP[c] '''+''' 1 dCDP[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Genes have been associated with this reaction based on different elements listed below. | Genes have been associated with this reaction based on different elements listed below. | ||
| + | * Gene: [[SJ01032]] | ||
| + | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
* Gene: [[SJ20076]] | * Gene: [[SJ20076]] | ||
** Source: [[orthology-ectocarpus_siliculosus]] | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
| Line 24: | Line 26: | ||
** Source: [[annotation-saccharina_japonica_genome]] | ** Source: [[annotation-saccharina_japonica_genome]] | ||
*** Assignment: EC-NUMBER | *** Assignment: EC-NUMBER | ||
| − | |||
** Source: [[orthology-arabidopsis_thaliana]] | ** Source: [[orthology-arabidopsis_thaliana]] | ||
| − | |||
** Source: [[orthology-ectocarpus_siliculosus]] | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
* Gene: [[SJ08159]] | * Gene: [[SJ08159]] | ||
| Line 49: | Line 49: | ||
== External links == | == External links == | ||
* RHEA: | * RHEA: | ||
| − | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id= | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25095 25095] |
* LIGAND-RXN: | * LIGAND-RXN: | ||
** [http://www.genome.jp/dbget-bin/www_bget?R01665 R01665] | ** [http://www.genome.jp/dbget-bin/www_bget?R01665 R01665] | ||
{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
| − | |||
{{#set: ec number=EC-2.7.4.25}} | {{#set: ec number=EC-2.7.4.25}} | ||
{{#set: ec number=EC-2.7.4.14}} | {{#set: ec number=EC-2.7.4.14}} | ||
{{#set: ec number=EC-2.7.4.13}} | {{#set: ec number=EC-2.7.4.13}} | ||
| − | {{#set: gene associated=SJ20076|SJ21099 | + | {{#set: common name=dCMP kinase}} |
| + | {{#set: gene associated=SJ01032|SJ20076|SJ21099|SJ08159|SJ21967}} | ||
{{#set: in pathway=PWY-7197}} | {{#set: in pathway=PWY-7197}} | ||
{{#set: reconstruction category=orthology|annotation}} | {{#set: reconstruction category=orthology|annotation}} | ||
| − | {{#set: reconstruction source=orthology-arabidopsis_thaliana | + | {{#set: reconstruction source=orthology-arabidopsis_thaliana|annotation-saccharina_japonica_genome|orthology-ectocarpus_siliculosus}} |
{{#set: reconstruction tool=pantograph|pathwaytools}} | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
Latest revision as of 13:56, 10 January 2019
Contents
Reaction RXN-7913
- direction:
- LEFT-TO-RIGHT
- ec number:
- common name:
- dCMP kinase
- Synonym(s):
Reaction Formula
- With identifiers:
- With common name(s):
- 1 ATP[c] + 1 dCMP[c] => 1 ADP[c] + 1 dCDP[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: SJ01032
- Source: orthology-ectocarpus_siliculosus
- Gene: SJ20076
- Source: orthology-ectocarpus_siliculosus
- Gene: SJ21099
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: orthology-arabidopsis_thaliana
- Source: orthology-ectocarpus_siliculosus
- Source: annotation-saccharina_japonica_genome
- Gene: SJ08159
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: annotation-saccharina_japonica_genome
- Gene: SJ21967
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: orthology-ectocarpus_siliculosus
- Source: annotation-saccharina_japonica_genome
Pathways
- PWY-7197, pyrimidine deoxyribonucleotide phosphorylation: PWY-7197
- 4 reactions found over 4 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-arabidopsis_thaliana
- Tool: pantograph
- Source: orthology-ectocarpus_siliculosus
- Tool: pantograph
- Source: orthology-arabidopsis_thaliana
- Category: annotation
- Source: annotation-saccharina_japonica_genome
- Tool: pathwaytools
- Source: annotation-saccharina_japonica_genome
External links
