Difference between revisions of "6.3.5.6-RXN"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=6.3.5.6-RXN 6.3.5.6-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** anspartyl-tRNA(Asn) ami...")
 
 
Line 3: Line 3:
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
−
* common name:
 
−
** anspartyl-tRNA(Asn) amidotransferase
 
 
* ec number:
 
* ec number:
 
** [http://enzyme.expasy.org/EC/6.3.5.6 EC-6.3.5.6]
 
** [http://enzyme.expasy.org/EC/6.3.5.6 EC-6.3.5.6]
 +
* common name:
 +
** anspartyl-tRNA(Asn) amidotransferase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[GLN]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[L-aspartyl-tRNAAsn]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Pi]][c] '''+''' 1 [[Charged-ASN-tRNAs]][c] '''+''' 1 [[GLT]][c]
+
** 1 [[GLN]][c] '''+''' 1 [[L-aspartyl-tRNAAsn]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[GLT]][c] '''+''' 1 [[Charged-ASN-tRNAs]][c] '''+''' 1 [[Pi]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[ADP]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 L-glutamine[c] '''+''' 1 H2O[c] '''+''' 1 an L-aspartyl-[tRNAAsn][c] '''+''' 1 ATP[c] '''=>''' 1 ADP[c] '''+''' 1 H+[c] '''+''' 1 phosphate[c] '''+''' 1 an L-asparaginyl-[tRNAasn][c] '''+''' 1 L-glutamate[c]
+
** 1 L-glutamine[c] '''+''' 1 an L-aspartyl-[tRNAAsn][c] '''+''' 1 ATP[c] '''+''' 1 H2O[c] '''=>''' 1 L-glutamate[c] '''+''' 1 an L-asparaginyl-[tRNAAsn][c] '''+''' 1 phosphate[c] '''+''' 1 H+[c] '''+''' 1 ADP[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[SJ08904]]
 +
** Source: [[annotation-saccharina_japonica_genome]]
 +
*** Assignment: EC-NUMBER
 
* Gene: [[SJ01848]]
 
* Gene: [[SJ01848]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
Line 23: Line 26:
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
−
* Gene: [[SJ18954]]
 
−
** Source: [[orthology-ectocarpus_siliculosus]]
 
−
* Gene: [[SJ08904]]
 
−
** Source: [[annotation-saccharina_japonica_genome]]
 
−
*** Assignment: EC-NUMBER
 
−
* Gene: [[SJ20233]]
 
−
** Source: [[orthology-ectocarpus_siliculosus]]
 
 
* Gene: [[SJ05621]]
 
* Gene: [[SJ05621]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
Line 36: Line 32:
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
 +
* Gene: [[SJ18954]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
* Gene: [[SJ20233]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 
== Pathways  ==
 
== Pathways  ==
 
* [[PWY490-4]], L-asparagine biosynthesis III (tRNA-dependent): [http://metacyc.org/META/NEW-IMAGE?object=PWY490-4 PWY490-4]
 
* [[PWY490-4]], L-asparagine biosynthesis III (tRNA-dependent): [http://metacyc.org/META/NEW-IMAGE?object=PWY490-4 PWY490-4]
Line 48: Line 48:
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14513 14513]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14514 14514]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
 
** [http://www.genome.jp/dbget-bin/www_bget?R04212 R04212]
 
** [http://www.genome.jp/dbget-bin/www_bget?R04212 R04212]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=anspartyl-tRNA(Asn) amidotransferase}}
 
 
{{#set: ec number=EC-6.3.5.6}}
 
{{#set: ec number=EC-6.3.5.6}}
−
{{#set: gene associated=SJ01848|SJ08903|SJ18954|SJ08904|SJ20233|SJ05621|SJ22527}}
+
{{#set: common name=anspartyl-tRNA(Asn) amidotransferase}}
 +
{{#set: gene associated=SJ08904|SJ01848|SJ08903|SJ05621|SJ22527|SJ18954|SJ20233}}
 
{{#set: in pathway=PWY490-4}}
 
{{#set: in pathway=PWY490-4}}
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction source=orthology-ectocarpus_siliculosus|annotation-saccharina_japonica_genome}}
 
{{#set: reconstruction source=orthology-ectocarpus_siliculosus|annotation-saccharina_japonica_genome}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 14:03, 10 January 2019

Reaction 6.3.5.6-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • common name:
    • anspartyl-tRNA(Asn) amidotransferase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 L-glutamine[c] + 1 an L-aspartyl-[tRNAAsn][c] + 1 ATP[c] + 1 H2O[c] => 1 L-glutamate[c] + 1 an L-asparaginyl-[tRNAAsn][c] + 1 phosphate[c] + 1 H+[c] + 1 ADP[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY490-4, L-asparagine biosynthesis III (tRNA-dependent): PWY490-4
    • 2 reactions found over 3 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/sjapgem/index.php?title=6.3.5.6-RXN&oldid=20170"