Difference between revisions of "2.4.1.68-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.4.1.68-RXN 2.4.1.68-RXN] == * direction: ** REVERSIBLE * common name: ** glycoprotein 6-alpha-L-f...")
 
 
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.4.1.68-RXN 2.4.1.68-RXN] ==
 
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.4.1.68-RXN 2.4.1.68-RXN] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
−
* common name:
+
−
** glycoprotein 6-alpha-L-fucosyltransferase
+
 
* ec number:
 
* ec number:
 
** [http://enzyme.expasy.org/EC/2.4.1.68 EC-2.4.1.68]
 
** [http://enzyme.expasy.org/EC/2.4.1.68 EC-2.4.1.68]
 +
* common name:
 +
** glycoprotein 6-alpha-L-fucosyltransferase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[2-2-N-linked-Glycan]][c] '''+''' 1 [[CPD-13118]][c] '''<=>''' 1 [[GDP]][c] '''+''' 1 [[N4-N-ACETYL-BETA-D-GLUCOSAMINYL-F6]][c] '''+''' 1 [[PROTON]][c]
+
** 1 [[CPD-13118]][c] '''+''' 1 [[2-2-N-linked-Glycan]][c] '''=>''' 1 [[N4-N-ACETYL-BETA-D-GLUCOSAMINYL-F6]][c] '''+''' 1 [[GDP]][c] '''+''' 1 [[PROTON]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 N4-{N-acetyl-&beta;-D-glucosaminyl-(1,2)-&alpha;-D-mannosyl-(1,3)-[N-acetyl-&beta;-D-glucosaminyl-(1,2)-&alpha;-D-mannosyl-(1,6)]-&beta;-D-mannosyl-(1,4)-N-acetyl-&beta;-D-glucosaminyl-(1,4)-N-acetyl-&beta;-D-glucosaminyl}-protein-L-asparagine[c] '''+''' 1 GDP-&beta;-L-fucose[c] '''<=>''' 1 GDP[c] '''+''' 1 an N4-{N-acetyl-&beta;-D-glucosaminyl-(1,2)-&alpha;-D-mannosyl-(1,3)-[N-acetyl-&beta;-D-glucosaminyl-(1,2)-&alpha;-D-mannosyl-(1,6)]-&beta;-D-mannosyl-(1,4)-N-acetyl-&beta;-D-glucosaminyl-(1,4)-[&alpha;-L-fucosyl-(1,6)]-N-acetyl-&beta;-D-glucosaminyl}-L-asparagine-[protein][c] '''+''' 1 H+[c]
+
** 1 GDP-&beta;-L-fucose[c] '''+''' 1 Man3GlcNAc4-[protein][c] '''=>''' 1 an N4-{&beta;-D-GlcNAc-(1&rarr;2)-&alpha;-D-Man-(1&rarr;3)-[&beta;-D-GlcNAc-(1&rarr;2)-&alpha;-D-Man-(1&rarr;6)]-&beta;-D-Man-(1&rarr;4)-&beta;-D-GlcNAc-(1&rarr;4)-[&alpha;-L-Fuc-(1&rarr;6)]-&beta;-D-GlcNAc}-L-asparaginyl-[protein][c] '''+''' 1 GDP[c] '''+''' 1 H+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[SJ07771]]
+
* Gene: [[SJ02940]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
Line 23: Line 23:
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ02940]]
+
* Gene: [[SJ07771]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
 
== Pathways  ==
 
== Pathways  ==
 +
* [[PWY-7426]], complex N-linked glycan biosynthesis (vertebrates): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7426 PWY-7426]
 +
** '''4''' reactions found over '''10''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[annotation]]
 
* Category: [[annotation]]
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* UNIPROT:
 
* UNIPROT:
 
** [http://www.uniprot.org/uniprot/Q9BYC5 Q9BYC5]
 
** [http://www.uniprot.org/uniprot/Q9BYC5 Q9BYC5]
−
{{#set: direction=REVERSIBLE}}
+
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=glycoprotein 6-alpha-L-fucosyltransferase}}
+
 
{{#set: ec number=EC-2.4.1.68}}
 
{{#set: ec number=EC-2.4.1.68}}
−
{{#set: gene associated=SJ07771|SJ22297|SJ02940}}
+
{{#set: common name=glycoprotein 6-alpha-L-fucosyltransferase}}
−
{{#set: in pathway=}}
+
{{#set: gene associated=SJ02940|SJ22297|SJ07771}}
 +
{{#set: in pathway=PWY-7426}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction source=annotation-saccharina_japonica_genome}}
 
{{#set: reconstruction source=annotation-saccharina_japonica_genome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 14:04, 10 January 2019

Reaction 2.4.1.68-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • common name:
    • glycoprotein 6-alpha-L-fucosyltransferase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 GDP-β-L-fucose[c] + 1 Man3GlcNAc4-[protein][c] => 1 an N4-{β-D-GlcNAc-(1→2)-α-D-Man-(1→3)-[β-D-GlcNAc-(1→2)-α-D-Man-(1→6)]-β-D-Man-(1→4)-β-D-GlcNAc-(1→4)-[α-L-Fuc-(1→6)]-β-D-GlcNAc}-L-asparaginyl-[protein][c] + 1 GDP[c] + 1 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7426, complex N-linked glycan biosynthesis (vertebrates): PWY-7426
    • 4 reactions found over 10 reactions in the full pathway

Reconstruction information

External links





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