Difference between revisions of "RXN0-308"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-308 RXN0-308] == * direction: ** LEFT-TO-RIGHT * common name: ** L-cysteine:[protein cysteine]...")
 
 
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* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
−
* common name:
 
−
** L-cysteine:[protein cysteine] sulfurtransferase
 
 
* ec number:
 
* ec number:
 
** [http://enzyme.expasy.org/EC/2.8.1.7 EC-2.8.1.7]
 
** [http://enzyme.expasy.org/EC/2.8.1.7 EC-2.8.1.7]
 +
* common name:
 +
** L-cysteine:[protein cysteine] sulfurtransferase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[Cysteine-Desulfurase-L-cysteine]][c] '''+''' 1 [[CYS]][c] '''=>''' 1 [[L-ALPHA-ALANINE]][c] '''+''' 1 [[L-Cysteine-Desulfurase-persulfide]][c]
+
** 1 [[Cysteine-Desulfurase-L-cysteine]][c] '''+''' 1 [[CYS]][c] '''=>''' 1 [[L-Cysteine-Desulfurase-persulfide]][c] '''+''' 1 [[L-ALPHA-ALANINE]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 an [L-cysteine desulfurase]-L-cysteine[c] '''+''' 1 L-cysteine[c] '''=>''' 1 L-alanine[c] '''+''' 1 an [L-cysteine desulfurase] L-cysteine persulfide[c]
+
** 1 an [L-cysteine desulfurase]-L-cysteine[c] '''+''' 1 L-cysteine[c] '''=>''' 1 an [L-cysteine desulfurase]-S-sulfanyl-L-cysteine[c] '''+''' 1 L-alanine[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[SJ09474]]
+
* Gene: [[SJ17324]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
 
** Source: [[orthology-ectocarpus_siliculosus]]
 
** Source: [[orthology-ectocarpus_siliculosus]]
 +
* Gene: [[SJ03223]]
 +
** Source: [[annotation-saccharina_japonica_genome]]
 +
*** Assignment: EC-NUMBER
 
* Gene: [[SJ13485]]
 
* Gene: [[SJ13485]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
−
* Gene: [[SJ17324]]
+
* Gene: [[SJ04060]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
 
** Source: [[orthology-ectocarpus_siliculosus]]
 
** Source: [[orthology-ectocarpus_siliculosus]]
−
* Gene: [[SJ19133]]
+
* Gene: [[SJ09474]]
−
** Source: [[annotation-saccharina_japonica_genome]]
+
−
*** Assignment: EC-NUMBER
+
−
* Gene: [[SJ04060]]
+
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
 
** Source: [[orthology-ectocarpus_siliculosus]]
 
** Source: [[orthology-ectocarpus_siliculosus]]
−
* Gene: [[SJ03223]]
+
* Gene: [[SJ19133]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
 +
* [[PWY-7892]], tRNA-uridine 2-thiolation (bacteria): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7892 PWY-7892]
 +
** '''3''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY-7888]], tRNA-uridine 2-thiolation (cytoplasmic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7888 PWY-7888]
 +
** '''2''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-6891]], thiazole biosynthesis II (aerobic bacteria): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6891 PWY-6891]
 +
** '''4''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-7891]], tRNA-uridine 2-thiolation (yeast mitochondria): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7891 PWY-7891]
 +
** '''1''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-7889]], tRNA-uridine 2-thiolation (mammalian mitochondria): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7889 PWY-7889]
 +
** '''2''' reactions found over '''4''' reactions in the full pathway
 
* [[PWY-6892]], thiazole biosynthesis I (facultative anaerobic bacteria): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6892 PWY-6892]
 
* [[PWY-6892]], thiazole biosynthesis I (facultative anaerobic bacteria): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6892 PWY-6892]
 
** '''5''' reactions found over '''7''' reactions in the full pathway
 
** '''5''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-7904]], tRNA-uridine 2-thiolation (thermophilic bacteria): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7904 PWY-7904]
 +
** '''1''' reactions found over '''5''' reactions in the full pathway
 
* [[PWY0-1021]], L-alanine biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1021 PWY0-1021]
 
* [[PWY0-1021]], L-alanine biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1021 PWY0-1021]
 
** '''1''' reactions found over '''1''' reactions in the full pathway
 
** '''1''' reactions found over '''1''' reactions in the full pathway
−
* [[PWY-6891]], thiazole biosynthesis II (aerobic bacteria): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6891 PWY-6891]
 
−
** '''4''' reactions found over '''7''' reactions in the full pathway
 
 
* [[PWY-6823]], molybdenum cofactor biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6823 PWY-6823]
 
* [[PWY-6823]], molybdenum cofactor biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6823 PWY-6823]
−
** '''8''' reactions found over '''8''' reactions in the full pathway
+
** '''7''' reactions found over '''8''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
Line 55: Line 65:
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17458 17458]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
 
** [http://www.genome.jp/dbget-bin/www_bget?R07460 R07460]
 
** [http://www.genome.jp/dbget-bin/www_bget?R07460 R07460]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=L-cysteine:[protein cysteine] sulfurtransferase}}
 
 
{{#set: ec number=EC-2.8.1.7}}
 
{{#set: ec number=EC-2.8.1.7}}
−
{{#set: gene associated=SJ09474|SJ13485|SJ17324|SJ19133|SJ04060|SJ03223}}
+
{{#set: common name=L-cysteine:[protein cysteine] sulfurtransferase}}
−
{{#set: in pathway=PWY-6892|PWY0-1021|PWY-6891|PWY-6823}}
+
{{#set: gene associated=SJ17324|SJ03223|SJ13485|SJ04060|SJ09474|SJ19133}}
 +
{{#set: in pathway=PWY-7892|PWY-7888|PWY-6891|PWY-7891|PWY-7889|PWY-6892|PWY-7904|PWY0-1021|PWY-6823}}
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction source=orthology-ectocarpus_siliculosus|annotation-saccharina_japonica_genome}}
+
{{#set: reconstruction source=annotation-saccharina_japonica_genome|orthology-ectocarpus_siliculosus}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 14:14, 10 January 2019

Reaction RXN0-308

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • common name:
    • L-cysteine:[protein cysteine] sulfurtransferase
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7892, tRNA-uridine 2-thiolation (bacteria): PWY-7892
    • 3 reactions found over 8 reactions in the full pathway
  • PWY-7888, tRNA-uridine 2-thiolation (cytoplasmic): PWY-7888
    • 2 reactions found over 7 reactions in the full pathway
  • PWY-6891, thiazole biosynthesis II (aerobic bacteria): PWY-6891
    • 4 reactions found over 7 reactions in the full pathway
  • PWY-7891, tRNA-uridine 2-thiolation (yeast mitochondria): PWY-7891
    • 1 reactions found over 4 reactions in the full pathway
  • PWY-7889, tRNA-uridine 2-thiolation (mammalian mitochondria): PWY-7889
    • 2 reactions found over 4 reactions in the full pathway
  • PWY-6892, thiazole biosynthesis I (facultative anaerobic bacteria): PWY-6892
    • 5 reactions found over 7 reactions in the full pathway
  • PWY-7904, tRNA-uridine 2-thiolation (thermophilic bacteria): PWY-7904
    • 1 reactions found over 5 reactions in the full pathway
  • PWY0-1021, L-alanine biosynthesis III: PWY0-1021
    • 1 reactions found over 1 reactions in the full pathway
  • PWY-6823, molybdenum cofactor biosynthesis: PWY-6823
    • 7 reactions found over 8 reactions in the full pathway

Reconstruction information

External links


"L-cysteine:[protein cysteine] sulfurtransferase" cannot be used as a page name in this wiki.



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