Difference between revisions of "INORGPYROPHOSPHAT-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=INORGPYROPHOSPHAT-RXN INORGPYROPHOSPHAT-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** ino...")
 
 
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* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
−
* common name:
 
−
** inorganic diphosphatase
 
−
** inorganic pyrophosphatase
 
 
* ec number:
 
* ec number:
 
** [http://enzyme.expasy.org/EC/3.6.1.1 EC-3.6.1.1]
 
** [http://enzyme.expasy.org/EC/3.6.1.1 EC-3.6.1.1]
 +
* common name:
 +
** inorganic pyrophosphatase
 +
** inorganic diphosphatase
 
* Synonym(s):
 
* Synonym(s):
  
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== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[SJ11196]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
* Gene: [[SJ06186]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
* Gene: [[SJ07746]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
* Gene: [[SJ19856]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 
* Gene: [[SJ19765]]
 
* Gene: [[SJ19765]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
−
** Source: [[orthology-ectocarpus_siliculosus]]
 
 
** Source: [[orthology-arabidopsis_thaliana]]
 
** Source: [[orthology-arabidopsis_thaliana]]
−
* Gene: [[SJ11196]]
 
 
** Source: [[orthology-ectocarpus_siliculosus]]
 
** Source: [[orthology-ectocarpus_siliculosus]]
−
* Gene: [[SJ17386]]
+
* Gene: [[SJ09890]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ21090]]
+
** Source: [[orthology-ectocarpus_siliculosus]]
−
** Source: [[annotation-saccharina_japonica_genome]]
+
* Gene: [[SJ11426]]
−
*** Assignment: GO-TERM
+
−
* Gene: [[SJ17098]]
+
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
 
** Source: [[orthology-ectocarpus_siliculosus]]
 
** Source: [[orthology-ectocarpus_siliculosus]]
−
** Source: [[orthology-nannochloropsis_salina]]
 
−
** Source: [[orthology-nannochloropsis_salina]]
 
−
** Source: [[orthology-arabidopsis_thaliana]]
 
 
* Gene: [[SJ10687]]
 
* Gene: [[SJ10687]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
−
** Source: [[orthology-ectocarpus_siliculosus]]
 
 
** Source: [[orthology-nannochloropsis_salina]]
 
** Source: [[orthology-nannochloropsis_salina]]
 
** Source: [[orthology-nannochloropsis_salina]]
 
** Source: [[orthology-nannochloropsis_salina]]
−
* Gene: [[SJ06186]]
 
 
** Source: [[orthology-ectocarpus_siliculosus]]
 
** Source: [[orthology-ectocarpus_siliculosus]]
−
* Gene: [[SJ19856]]
+
* Gene: [[SJ17386]]
−
** Source: [[orthology-ectocarpus_siliculosus]]
+
** Source: [[annotation-saccharina_japonica_genome]]
−
* Gene: [[SJ11426]]
+
*** Assignment: GO-TERM
 +
* Gene: [[SJ17098]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
−
** Source: [[orthology-ectocarpus_siliculosus]]
+
** Source: [[orthology-nannochloropsis_salina]]
−
* Gene: [[SJ07746]]
+
** Source: [[orthology-nannochloropsis_salina]]
−
** Source: [[orthology-ectocarpus_siliculosus]]
+
** Source: [[orthology-arabidopsis_thaliana]]
−
* Gene: [[SJ09890]]
+
−
** Source: [[annotation-saccharina_japonica_genome]]
+
−
*** Assignment: GO-TERM
+
 
** Source: [[orthology-ectocarpus_siliculosus]]
 
** Source: [[orthology-ectocarpus_siliculosus]]
 
* Gene: [[SJ17991]]
 
* Gene: [[SJ17991]]
Line 62: Line 59:
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
 
** Source: [[orthology-ectocarpus_siliculosus]]
 
** Source: [[orthology-ectocarpus_siliculosus]]
 +
* Gene: [[SJ21090]]
 +
** Source: [[annotation-saccharina_japonica_genome]]
 +
*** Assignment: GO-TERM
 
== Pathways  ==
 
== Pathways  ==
 +
* [[PWY-7807]], glyphosate degradation III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7807 PWY-7807]
 +
** '''2''' reactions found over '''7''' reactions in the full pathway
 
* [[PWY-7805]], aminomethylphosphonate degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7805 PWY-7805]
 
* [[PWY-7805]], aminomethylphosphonate degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7805 PWY-7805]
 
** '''2''' reactions found over '''8''' reactions in the full pathway
 
** '''2''' reactions found over '''8''' reactions in the full pathway
−
* [[PWY-7807]], glyphosate degradation III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7807 PWY-7807]
 
−
** '''2''' reactions found over '''7''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
 
** Source: [[orthology-arabidopsis_thaliana]]
 
** Source: [[orthology-arabidopsis_thaliana]]
−
*** Tool: [[pantograph]]
 
−
** Source: [[orthology-ectocarpus_siliculosus]]
 
 
*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
 
** Source: [[orthology-nannochloropsis_salina]]
 
** Source: [[orthology-nannochloropsis_salina]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 
*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
 
* Category: [[annotation]]
 
* Category: [[annotation]]
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** [http://www.uniprot.org/uniprot/O65151 O65151]
 
** [http://www.uniprot.org/uniprot/O65151 O65151]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=inorganic diphosphatase}}
 
−
{{#set: common name=inorganic pyrophosphatase}}
 
 
{{#set: ec number=EC-3.6.1.1}}
 
{{#set: ec number=EC-3.6.1.1}}
−
{{#set: gene associated=SJ19765|SJ11196|SJ17386|SJ21090|SJ17098|SJ10687|SJ06186|SJ19856|SJ11426|SJ07746|SJ09890|SJ17991}}
+
{{#set: common name=inorganic pyrophosphatase}}
−
{{#set: in pathway=PWY-7805|PWY-7807}}
+
{{#set: common name=inorganic diphosphatase}}
 +
{{#set: gene associated=SJ11196|SJ06186|SJ07746|SJ19856|SJ19765|SJ09890|SJ11426|SJ10687|SJ17386|SJ17098|SJ17991|SJ21090}}
 +
{{#set: in pathway=PWY-7807|PWY-7805}}
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction source=orthology-arabidopsis_thaliana|orthology-ectocarpus_siliculosus|orthology-nannochloropsis_salina|annotation-saccharina_japonica_genome}}
+
{{#set: reconstruction source=orthology-arabidopsis_thaliana|annotation-saccharina_japonica_genome|orthology-nannochloropsis_salina|orthology-ectocarpus_siliculosus}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 14:16, 10 January 2019

Reaction INORGPYROPHOSPHAT-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • common name:
    • inorganic pyrophosphatase
    • inorganic diphosphatase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 H2O[c] + 1 diphosphate[c] => 2 phosphate[c] + 1 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7807, glyphosate degradation III: PWY-7807
    • 2 reactions found over 7 reactions in the full pathway
  • PWY-7805, aminomethylphosphonate degradation: PWY-7805
    • 2 reactions found over 8 reactions in the full pathway

Reconstruction information

External links





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