Difference between revisions of "GLUTSEMIALDEHYDROG-RXN"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLUTSEMIALDEHYDROG-RXN GLUTSEMIALDEHYDROG-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** g...") |
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Line 3: | Line 3: | ||
* direction: | * direction: | ||
** LEFT-TO-RIGHT | ** LEFT-TO-RIGHT | ||
− | |||
− | |||
* ec number: | * ec number: | ||
** [http://enzyme.expasy.org/EC/1.2.1.41 EC-1.2.1.41] | ** [http://enzyme.expasy.org/EC/1.2.1.41 EC-1.2.1.41] | ||
+ | * common name: | ||
+ | ** glutamate-5-semialdehyde dehydrogenase | ||
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
− | ** 1 [[L-GLUTAMATE-5-P]][c] '''+''' 1 [[ | + | ** 1 [[L-GLUTAMATE-5-P]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[L-GLUTAMATE_GAMMA-SEMIALDEHYDE]][c] '''+''' 1 [[Pi]][c] '''+''' 1 [[NADP]][c] |
* With common name(s): | * With common name(s): | ||
− | ** 1 γ-L-glutamyl 5-phosphate[c] '''+''' 1 | + | ** 1 γ-L-glutamyl 5-phosphate[c] '''+''' 1 NADPH[c] '''+''' 1 H+[c] '''=>''' 1 L-glutamate-5-semialdehyde[c] '''+''' 1 phosphate[c] '''+''' 1 NADP+[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
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** Source: [[annotation-saccharina_japonica_genome]] | ** Source: [[annotation-saccharina_japonica_genome]] | ||
*** Assignment: EC-NUMBER | *** Assignment: EC-NUMBER | ||
− | |||
** Source: [[orthology-nannochloropsis_salina]] | ** Source: [[orthology-nannochloropsis_salina]] | ||
** Source: [[orthology-arabidopsis_thaliana]] | ** Source: [[orthology-arabidopsis_thaliana]] | ||
+ | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
* Gene: [[SJ22406]] | * Gene: [[SJ22406]] | ||
** Source: [[annotation-saccharina_japonica_genome]] | ** Source: [[annotation-saccharina_japonica_genome]] | ||
*** Assignment: EC-NUMBER | *** Assignment: EC-NUMBER | ||
== Pathways == | == Pathways == | ||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
* [[ARGININE-SYN4-PWY]], L-ornithine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=ARGININE-SYN4-PWY ARGININE-SYN4-PWY] | * [[ARGININE-SYN4-PWY]], L-ornithine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=ARGININE-SYN4-PWY ARGININE-SYN4-PWY] | ||
** '''3''' reactions found over '''4''' reactions in the full pathway | ** '''3''' reactions found over '''4''' reactions in the full pathway | ||
+ | * [[PROSYN-PWY]], L-proline biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PROSYN-PWY PROSYN-PWY] | ||
+ | ** '''3''' reactions found over '''4''' reactions in the full pathway | ||
+ | * [[PWY-3341]], L-proline biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3341 PWY-3341] | ||
+ | ** '''4''' reactions found over '''5''' reactions in the full pathway | ||
* [[CITRULBIO-PWY]], L-citrulline biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=CITRULBIO-PWY CITRULBIO-PWY] | * [[CITRULBIO-PWY]], L-citrulline biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=CITRULBIO-PWY CITRULBIO-PWY] | ||
− | ** ''' | + | ** '''7''' reactions found over '''8''' reactions in the full pathway |
+ | * [[PWY-6922]], L-Nδ-acetylornithine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6922 PWY-6922] | ||
+ | ** '''5''' reactions found over '''7''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
* Category: [[orthology]] | * Category: [[orthology]] | ||
** Source: [[orthology-arabidopsis_thaliana]] | ** Source: [[orthology-arabidopsis_thaliana]] | ||
− | |||
− | |||
*** Tool: [[pantograph]] | *** Tool: [[pantograph]] | ||
** Source: [[orthology-nannochloropsis_salina]] | ** Source: [[orthology-nannochloropsis_salina]] | ||
+ | *** Tool: [[pantograph]] | ||
+ | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
*** Tool: [[pantograph]] | *** Tool: [[pantograph]] | ||
* Category: [[annotation]] | * Category: [[annotation]] | ||
Line 50: | Line 50: | ||
== External links == | == External links == | ||
* RHEA: | * RHEA: | ||
− | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id= | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19543 19543] |
* LIGAND-RXN: | * LIGAND-RXN: | ||
** [http://www.genome.jp/dbget-bin/www_bget?R03313 R03313] | ** [http://www.genome.jp/dbget-bin/www_bget?R03313 R03313] | ||
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** [http://www.uniprot.org/uniprot/O04226 O04226] | ** [http://www.uniprot.org/uniprot/O04226 O04226] | ||
{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
− | |||
{{#set: ec number=EC-1.2.1.41}} | {{#set: ec number=EC-1.2.1.41}} | ||
+ | {{#set: common name=glutamate-5-semialdehyde dehydrogenase}} | ||
{{#set: gene associated=SJ02923|SJ22406}} | {{#set: gene associated=SJ02923|SJ22406}} | ||
− | {{#set: in pathway= | + | {{#set: in pathway=ARGININE-SYN4-PWY|PROSYN-PWY|PWY-3341|CITRULBIO-PWY|PWY-6922}} |
{{#set: reconstruction category=orthology|annotation}} | {{#set: reconstruction category=orthology|annotation}} | ||
{{#set: reconstruction source=orthology-arabidopsis_thaliana|orthology-ectocarpus_siliculosus|orthology-nannochloropsis_salina|annotation-saccharina_japonica_genome}} | {{#set: reconstruction source=orthology-arabidopsis_thaliana|orthology-ectocarpus_siliculosus|orthology-nannochloropsis_salina|annotation-saccharina_japonica_genome}} | ||
{{#set: reconstruction tool=pantograph|pathwaytools}} | {{#set: reconstruction tool=pantograph|pathwaytools}} |
Latest revision as of 14:27, 10 January 2019
Contents
Reaction GLUTSEMIALDEHYDROG-RXN
- direction:
- LEFT-TO-RIGHT
- ec number:
- common name:
- glutamate-5-semialdehyde dehydrogenase
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 L-GLUTAMATE-5-P[c] + 1 NADPH[c] + 1 PROTON[c] => 1 L-GLUTAMATE_GAMMA-SEMIALDEHYDE[c] + 1 Pi[c] + 1 NADP[c]
- With common name(s):
- 1 γ-L-glutamyl 5-phosphate[c] + 1 NADPH[c] + 1 H+[c] => 1 L-glutamate-5-semialdehyde[c] + 1 phosphate[c] + 1 NADP+[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: SJ02923
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: orthology-nannochloropsis_salina
- Source: orthology-arabidopsis_thaliana
- Source: orthology-ectocarpus_siliculosus
- Source: annotation-saccharina_japonica_genome
- Gene: SJ22406
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: annotation-saccharina_japonica_genome
Pathways
- ARGININE-SYN4-PWY, L-ornithine biosynthesis II: ARGININE-SYN4-PWY
- 3 reactions found over 4 reactions in the full pathway
- PROSYN-PWY, L-proline biosynthesis I: PROSYN-PWY
- 3 reactions found over 4 reactions in the full pathway
- PWY-3341, L-proline biosynthesis III: PWY-3341
- 4 reactions found over 5 reactions in the full pathway
- CITRULBIO-PWY, L-citrulline biosynthesis: CITRULBIO-PWY
- 7 reactions found over 8 reactions in the full pathway
- PWY-6922, L-Nδ-acetylornithine biosynthesis: PWY-6922
- 5 reactions found over 7 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-arabidopsis_thaliana
- Tool: pantograph
- Source: orthology-nannochloropsis_salina
- Tool: pantograph
- Source: orthology-ectocarpus_siliculosus
- Tool: pantograph
- Source: orthology-arabidopsis_thaliana
- Category: annotation
- Source: annotation-saccharina_japonica_genome
- Tool: pathwaytools
- Source: annotation-saccharina_japonica_genome
External links