Difference between revisions of "AIRS-RXN"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=AIRS-RXN AIRS-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** phosphoribosylformylglycinami...") |
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* direction: | * direction: | ||
** LEFT-TO-RIGHT | ** LEFT-TO-RIGHT | ||
| − | |||
| − | |||
* ec number: | * ec number: | ||
** [http://enzyme.expasy.org/EC/6.3.3.1 EC-6.3.3.1] | ** [http://enzyme.expasy.org/EC/6.3.3.1 EC-6.3.3.1] | ||
| + | * common name: | ||
| + | ** phosphoribosylformylglycinamide cyclo-ligase | ||
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
| − | ** 1 [[ATP]][c] '''+''' 1 [[5-PHOSPHORIBOSYL-N-FORMYLGLYCINEAMIDINE]][c] '''=>''' 1 [[ | + | ** 1 [[ATP]][c] '''+''' 1 [[5-PHOSPHORIBOSYL-N-FORMYLGLYCINEAMIDINE]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[ADP]][c] '''+''' 1 [[Pi]][c] '''+''' 1 [[5-PHOSPHORIBOSYL-5-AMINOIMIDAZOLE]][c] |
* With common name(s): | * With common name(s): | ||
| − | ** 1 ATP[c] '''+''' 1 2-(formamido)-N1-(5-phospho-β-D-ribosyl)acetamidine[c] '''=>''' 1 | + | ** 1 ATP[c] '''+''' 1 2-(formamido)-N1-(5-phospho-β-D-ribosyl)acetamidine[c] '''=>''' 1 H+[c] '''+''' 1 ADP[c] '''+''' 1 phosphate[c] '''+''' 1 5-amino-1-(5-phospho-β-D-ribosyl)imidazole[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
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*** Assignment: EC-NUMBER | *** Assignment: EC-NUMBER | ||
== Pathways == | == Pathways == | ||
| + | * [[PWY-6277]], superpathway of 5-aminoimidazole ribonucleotide biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6277 PWY-6277] | ||
| + | ** '''6''' reactions found over '''9''' reactions in the full pathway | ||
* [[PWY-6121]], 5-aminoimidazole ribonucleotide biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6121 PWY-6121] | * [[PWY-6121]], 5-aminoimidazole ribonucleotide biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6121 PWY-6121] | ||
** '''5''' reactions found over '''5''' reactions in the full pathway | ** '''5''' reactions found over '''5''' reactions in the full pathway | ||
* [[PWY-6122]], 5-aminoimidazole ribonucleotide biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6122 PWY-6122] | * [[PWY-6122]], 5-aminoimidazole ribonucleotide biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6122 PWY-6122] | ||
** '''4''' reactions found over '''5''' reactions in the full pathway | ** '''4''' reactions found over '''5''' reactions in the full pathway | ||
| − | |||
| − | |||
== Reconstruction information == | == Reconstruction information == | ||
* Category: [[annotation]] | * Category: [[annotation]] | ||
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== External links == | == External links == | ||
* RHEA: | * RHEA: | ||
| − | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id= | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23033 23033] |
* LIGAND-RXN: | * LIGAND-RXN: | ||
** [http://www.genome.jp/dbget-bin/www_bget?R04208 R04208] | ** [http://www.genome.jp/dbget-bin/www_bget?R04208 R04208] | ||
| Line 54: | Line 54: | ||
** [http://www.uniprot.org/uniprot/P52424 P52424] | ** [http://www.uniprot.org/uniprot/P52424 P52424] | ||
{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
| − | |||
{{#set: ec number=EC-6.3.3.1}} | {{#set: ec number=EC-6.3.3.1}} | ||
| + | {{#set: common name=phosphoribosylformylglycinamide cyclo-ligase}} | ||
{{#set: gene associated=SJ06408}} | {{#set: gene associated=SJ06408}} | ||
| − | {{#set: in pathway=PWY- | + | {{#set: in pathway=PWY-6277|PWY-6121|PWY-6122}} |
{{#set: reconstruction category=annotation}} | {{#set: reconstruction category=annotation}} | ||
{{#set: reconstruction source=annotation-saccharina_japonica_genome}} | {{#set: reconstruction source=annotation-saccharina_japonica_genome}} | ||
{{#set: reconstruction tool=pathwaytools}} | {{#set: reconstruction tool=pathwaytools}} | ||
Latest revision as of 14:31, 10 January 2019
Contents
Reaction AIRS-RXN
- direction:
- LEFT-TO-RIGHT
- ec number:
- common name:
- phosphoribosylformylglycinamide cyclo-ligase
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 ATP[c] + 1 5-PHOSPHORIBOSYL-N-FORMYLGLYCINEAMIDINE[c] => 1 PROTON[c] + 1 ADP[c] + 1 Pi[c] + 1 5-PHOSPHORIBOSYL-5-AMINOIMIDAZOLE[c]
- With common name(s):
- 1 ATP[c] + 1 2-(formamido)-N1-(5-phospho-β-D-ribosyl)acetamidine[c] => 1 H+[c] + 1 ADP[c] + 1 phosphate[c] + 1 5-amino-1-(5-phospho-β-D-ribosyl)imidazole[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: SJ06408
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: annotation-saccharina_japonica_genome
Pathways
- PWY-6277, superpathway of 5-aminoimidazole ribonucleotide biosynthesis: PWY-6277
- 6 reactions found over 9 reactions in the full pathway
- PWY-6121, 5-aminoimidazole ribonucleotide biosynthesis I: PWY-6121
- 5 reactions found over 5 reactions in the full pathway
- PWY-6122, 5-aminoimidazole ribonucleotide biosynthesis II: PWY-6122
- 4 reactions found over 5 reactions in the full pathway
Reconstruction information
- Category: annotation
- Source: annotation-saccharina_japonica_genome
- Tool: pathwaytools
- Source: annotation-saccharina_japonica_genome
External links
- RHEA:
- LIGAND-RXN:
- UNIPROT:
