Difference between revisions of "RXN0-5398"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-5398 RXN0-5398] == * direction: ** REVERSIBLE * common name: ** pseudouridine-5'-phosphate gly...") |
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Line 3: | Line 3: | ||
* direction: | * direction: | ||
** REVERSIBLE | ** REVERSIBLE | ||
− | |||
− | |||
* ec number: | * ec number: | ||
** [http://enzyme.expasy.org/EC/4.2.1.70 EC-4.2.1.70] | ** [http://enzyme.expasy.org/EC/4.2.1.70 EC-4.2.1.70] | ||
+ | * common name: | ||
+ | ** pseudouridine-5'-phosphate glycosidase | ||
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
− | ** 1 [[ | + | ** 1 [[CPD-15317]][c] '''+''' 1 [[URACIL]][c] '''<=>''' 1 [[PSEUDOURIDINE-5-P]][c] '''+''' 1 [[WATER]][c] |
* With common name(s): | * With common name(s): | ||
− | ** 1 | + | ** 1 D-ribofuranose 5-phosphate[c] '''+''' 1 uracil[c] '''<=>''' 1 pseudouridine 5'-phosphate[c] '''+''' 1 H2O[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Line 33: | Line 33: | ||
== External links == | == External links == | ||
* RHEA: | * RHEA: | ||
− | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id= | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18340 18340] |
* LIGAND-RXN: | * LIGAND-RXN: | ||
** [http://www.genome.jp/dbget-bin/www_bget?R01055 R01055] | ** [http://www.genome.jp/dbget-bin/www_bget?R01055 R01055] | ||
Line 50: | Line 50: | ||
** [http://www.uniprot.org/uniprot/Q9PLW9 Q9PLW9] | ** [http://www.uniprot.org/uniprot/Q9PLW9 Q9PLW9] | ||
{{#set: direction=REVERSIBLE}} | {{#set: direction=REVERSIBLE}} | ||
− | |||
{{#set: ec number=EC-4.2.1.70}} | {{#set: ec number=EC-4.2.1.70}} | ||
+ | {{#set: common name=pseudouridine-5'-phosphate glycosidase}} | ||
{{#set: gene associated=SJ04700}} | {{#set: gene associated=SJ04700}} | ||
{{#set: in pathway=PWY-6019}} | {{#set: in pathway=PWY-6019}} | ||
{{#set: reconstruction category=orthology|annotation}} | {{#set: reconstruction category=orthology|annotation}} | ||
− | {{#set: reconstruction source= | + | {{#set: reconstruction source=annotation-saccharina_japonica_genome|orthology-ectocarpus_siliculosus}} |
{{#set: reconstruction tool=pantograph|pathwaytools}} | {{#set: reconstruction tool=pantograph|pathwaytools}} |
Latest revision as of 15:33, 10 January 2019
Contents
Reaction RXN0-5398
- direction:
- REVERSIBLE
- ec number:
- common name:
- pseudouridine-5'-phosphate glycosidase
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 CPD-15317[c] + 1 URACIL[c] <=> 1 PSEUDOURIDINE-5-P[c] + 1 WATER[c]
- With common name(s):
- 1 D-ribofuranose 5-phosphate[c] + 1 uracil[c] <=> 1 pseudouridine 5'-phosphate[c] + 1 H2O[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: SJ04700
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: orthology-ectocarpus_siliculosus
- Source: annotation-saccharina_japonica_genome
Pathways
- PWY-6019, pseudouridine degradation: PWY-6019
- 2 reactions found over 2 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-ectocarpus_siliculosus
- Tool: pantograph
- Source: orthology-ectocarpus_siliculosus
- Category: annotation
- Source: annotation-saccharina_japonica_genome
- Tool: pathwaytools
- Source: annotation-saccharina_japonica_genome
External links
- RHEA:
- LIGAND-RXN:
- UNIPROT: