Difference between revisions of "HYDROG-RXN"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=HYDROG-RXN HYDROG-RXN] == * direction: ** REVERSIBLE * ec number: ** [http://enzyme.expasy.org/EC/1...")
 
 
Line 9: Line 9:
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[HYDROGEN-MOLECULE]][c] '''+''' 2 [[Oxidized-ferredoxins]][c] '''<=>''' 2 [[PROTON]][c] '''+''' 2 [[Reduced-ferredoxins]][c]
+
** 1 [[HYDROGEN-MOLECULE]][c] '''+''' 2 [[Oxidized-ferredoxins]][c] '''<=>''' 2 [[Reduced-ferredoxins]][c] '''+''' 2 [[PROTON]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 H2[c] '''+''' 2 an oxidized ferredoxin [iron-sulfur] cluster[c] '''<=>''' 2 H+[c] '''+''' 2 a reduced ferredoxin [iron-sulfur] cluster[c]
+
** 1 H2[c] '''+''' 2 an oxidized ferredoxin [iron-sulfur] cluster[c] '''<=>''' 2 a reduced ferredoxin [iron-sulfur] cluster[c] '''+''' 2 H+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[SJ19006]]
 
−
** Source: [[orthology-ectocarpus_siliculosus]]
 
 
* Gene: [[SJ04494]]
 
* Gene: [[SJ04494]]
 
** Source: [[orthology-nannochloropsis_salina]]
 
** Source: [[orthology-nannochloropsis_salina]]
 
* Gene: [[SJ18864]]
 
* Gene: [[SJ18864]]
−
** Source: [[orthology-ectocarpus_siliculosus]]
 
 
** Source: [[orthology-nannochloropsis_salina]]
 
** Source: [[orthology-nannochloropsis_salina]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
* Gene: [[SJ19006]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-6780]], hydrogen production VI: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6780 PWY-6780]
 
−
** '''1''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY4LZ-257]], superpathway of fermentation (Chlamydomonas reinhardtii): [http://metacyc.org/META/NEW-IMAGE?object=PWY4LZ-257 PWY4LZ-257]
 
−
** '''7''' reactions found over '''13''' reactions in the full pathway
 
 
* [[PWY-6785]], hydrogen production VIII: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6785 PWY-6785]
 
* [[PWY-6785]], hydrogen production VIII: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6785 PWY-6785]
−
** '''1''' reactions found over '''1''' reactions in the full pathway
 
−
* [[PWY-6759]], hydrogen production III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6759 PWY-6759]
 
 
** '''1''' reactions found over '''1''' reactions in the full pathway
 
** '''1''' reactions found over '''1''' reactions in the full pathway
 
* [[GLUDEG-II-PWY]], L-glutamate degradation VII (to butanoate): [http://metacyc.org/META/NEW-IMAGE?object=GLUDEG-II-PWY GLUDEG-II-PWY]
 
* [[GLUDEG-II-PWY]], L-glutamate degradation VII (to butanoate): [http://metacyc.org/META/NEW-IMAGE?object=GLUDEG-II-PWY GLUDEG-II-PWY]
 
** '''3''' reactions found over '''6''' reactions in the full pathway
 
** '''3''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-6780]], hydrogen production VI: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6780 PWY-6780]
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-6759]], hydrogen production III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6759 PWY-6759]
 +
** '''1''' reactions found over '''1''' reactions in the full pathway
 +
* [[PWY4LZ-257]], superpathway of fermentation (Chlamydomonas reinhardtii): [http://metacyc.org/META/NEW-IMAGE?object=PWY4LZ-257 PWY4LZ-257]
 +
** '''7''' reactions found over '''13''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
−
** Source: [[orthology-ectocarpus_siliculosus]]
 
−
*** Tool: [[pantograph]]
 
 
** Source: [[orthology-nannochloropsis_salina]]
 
** Source: [[orthology-nannochloropsis_salina]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 
*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17448 17448]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
 
** [http://www.genome.jp/dbget-bin/www_bget?R00019 R00019]
 
** [http://www.genome.jp/dbget-bin/www_bget?R00019 R00019]
Line 104: Line 106:
 
{{#set: direction=REVERSIBLE}}
 
{{#set: direction=REVERSIBLE}}
 
{{#set: ec number=EC-1.12.7.2}}
 
{{#set: ec number=EC-1.12.7.2}}
−
{{#set: gene associated=SJ19006|SJ04494|SJ18864}}
+
{{#set: gene associated=SJ04494|SJ18864|SJ19006}}
−
{{#set: in pathway=PWY-6780|PWY4LZ-257|PWY-6785|PWY-6759|GLUDEG-II-PWY}}
+
{{#set: in pathway=PWY-6785|GLUDEG-II-PWY|PWY-6780|PWY-6759|PWY4LZ-257}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction source=orthology-ectocarpus_siliculosus|orthology-nannochloropsis_salina}}
+
{{#set: reconstruction source=orthology-nannochloropsis_salina|orthology-ectocarpus_siliculosus}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}

Latest revision as of 15:38, 10 January 2019

Reaction HYDROG-RXN

  • direction:
    • REVERSIBLE
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6785, hydrogen production VIII: PWY-6785
    • 1 reactions found over 1 reactions in the full pathway
  • GLUDEG-II-PWY, L-glutamate degradation VII (to butanoate): GLUDEG-II-PWY
    • 3 reactions found over 6 reactions in the full pathway
  • PWY-6780, hydrogen production VI: PWY-6780
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-6759, hydrogen production III: PWY-6759
    • 1 reactions found over 1 reactions in the full pathway
  • PWY4LZ-257, superpathway of fermentation (Chlamydomonas reinhardtii): PWY4LZ-257
    • 7 reactions found over 13 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/sjapgem/index.php?title=HYDROG-RXN&oldid=21286"