Difference between revisions of "RXN-13444"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13444 RXN-13444] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...") |
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== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
| − | ** 1 [[CPD-14424]][c] '''=>''' 1 [[ | + | ** 1 [[CPD-14424]][c] '''=>''' 1 [[WATER]][c] '''+''' 1 [[CPD-14425]][c] |
* With common name(s): | * With common name(s): | ||
| − | ** 1 (5Z,8Z,11Z,14Z,17Z)-3R-hydroxy-docosapentaenoyl-CoA[c] '''=>''' 1 (2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA | + | ** 1 (5Z,8Z,11Z,14Z,17Z)-3R-hydroxy-docosapentaenoyl-CoA[c] '''=>''' 1 H2O[c] '''+''' 1 (2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
| Line 23: | Line 23: | ||
== Pathways == | == Pathways == | ||
* [[PWY-7053]], docosahexaenoate biosynthesis I (lower eukaryotes): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7053 PWY-7053] | * [[PWY-7053]], docosahexaenoate biosynthesis I (lower eukaryotes): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7053 PWY-7053] | ||
| − | ** ''' | + | ** '''3''' reactions found over '''7''' reactions in the full pathway |
| − | + | ||
| − | + | ||
* [[PWY-7727]], docosahexaenoate biosynthesis IV (4-desaturase, mammals): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7727 PWY-7727] | * [[PWY-7727]], docosahexaenoate biosynthesis IV (4-desaturase, mammals): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7727 PWY-7727] | ||
| − | ** ''' | + | ** '''2''' reactions found over '''6''' reactions in the full pathway |
| + | * [[PWY-7606]], docosahexaenoate biosynthesis III (6-desaturase, mammals): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7606 PWY-7606] | ||
| + | ** '''8''' reactions found over '''14''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
* Category: [[annotation]] | * Category: [[annotation]] | ||
| Line 36: | Line 36: | ||
{{#set: ec number=EC-4.2.1.134}} | {{#set: ec number=EC-4.2.1.134}} | ||
{{#set: gene associated=SJ00783|SJ06882}} | {{#set: gene associated=SJ00783|SJ06882}} | ||
| − | {{#set: in pathway=PWY-7053|PWY- | + | {{#set: in pathway=PWY-7053|PWY-7727|PWY-7606}} |
{{#set: reconstruction category=annotation}} | {{#set: reconstruction category=annotation}} | ||
{{#set: reconstruction source=annotation-saccharina_japonica_genome}} | {{#set: reconstruction source=annotation-saccharina_japonica_genome}} | ||
{{#set: reconstruction tool=pathwaytools}} | {{#set: reconstruction tool=pathwaytools}} | ||
Latest revision as of 15:40, 10 January 2019
Contents
Reaction RXN-13444
- direction:
- LEFT-TO-RIGHT
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- With common name(s):
- 1 (5Z,8Z,11Z,14Z,17Z)-3R-hydroxy-docosapentaenoyl-CoA[c] => 1 H2O[c] + 1 (2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: SJ00783
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: annotation-saccharina_japonica_genome
- Gene: SJ06882
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: annotation-saccharina_japonica_genome
Pathways
- PWY-7053, docosahexaenoate biosynthesis I (lower eukaryotes): PWY-7053
- 3 reactions found over 7 reactions in the full pathway
- PWY-7727, docosahexaenoate biosynthesis IV (4-desaturase, mammals): PWY-7727
- 2 reactions found over 6 reactions in the full pathway
- PWY-7606, docosahexaenoate biosynthesis III (6-desaturase, mammals): PWY-7606
- 8 reactions found over 14 reactions in the full pathway
Reconstruction information
- Category: annotation
- Source: annotation-saccharina_japonica_genome
- Tool: pathwaytools
- Source: annotation-saccharina_japonica_genome
