Difference between revisions of "RXN-13641"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13641 RXN-13641] == * direction: ** REVERSIBLE * common name: ** β-carotene isomerase * ec...") |
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| Line 3: | Line 3: | ||
* direction: | * direction: | ||
** REVERSIBLE | ** REVERSIBLE | ||
| − | |||
| − | |||
* ec number: | * ec number: | ||
** [http://enzyme.expasy.org/EC/5.2.1.14 EC-5.2.1.14] | ** [http://enzyme.expasy.org/EC/5.2.1.14 EC-5.2.1.14] | ||
| + | * common name: | ||
| + | ** β-carotene isomerase | ||
* Synonym(s): | * Synonym(s): | ||
| Line 13: | Line 13: | ||
** 1 [[CPD1F-129]][c] '''<=>''' 1 [[CPD-14646]][c] | ** 1 [[CPD1F-129]][c] '''<=>''' 1 [[CPD-14646]][c] | ||
* With common name(s): | * With common name(s): | ||
| − | ** 1 | + | ** 1 β-carotene[c] '''<=>''' 1 9-cis-β-carotene[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Genes have been associated with this reaction based on different elements listed below. | Genes have been associated with this reaction based on different elements listed below. | ||
| + | * Gene: [[SJ06689]] | ||
| + | ** Source: [[annotation-saccharina_japonica_genome]] | ||
| + | *** Assignment: EC-NUMBER | ||
* Gene: [[SJ20376]] | * Gene: [[SJ20376]] | ||
** Source: [[annotation-saccharina_japonica_genome]] | ** Source: [[annotation-saccharina_japonica_genome]] | ||
*** Assignment: EC-NUMBER | *** Assignment: EC-NUMBER | ||
* Gene: [[SJ18022]] | * Gene: [[SJ18022]] | ||
| − | |||
| − | |||
| − | |||
** Source: [[annotation-saccharina_japonica_genome]] | ** Source: [[annotation-saccharina_japonica_genome]] | ||
*** Assignment: EC-NUMBER | *** Assignment: EC-NUMBER | ||
| Line 35: | Line 35: | ||
== External links == | == External links == | ||
* RHEA: | * RHEA: | ||
| − | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id= | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=34458 34458] |
| + | * LIGAND-RXN: | ||
| + | ** [http://www.genome.jp/dbget-bin/www_bget?R10282 R10282] | ||
{{#set: direction=REVERSIBLE}} | {{#set: direction=REVERSIBLE}} | ||
| − | |||
{{#set: ec number=EC-5.2.1.14}} | {{#set: ec number=EC-5.2.1.14}} | ||
| − | {{#set: gene associated=SJ20376|SJ18022 | + | {{#set: common name=β-carotene isomerase}} |
| + | {{#set: gene associated=SJ06689|SJ20376|SJ18022}} | ||
{{#set: in pathway=PWY-7101}} | {{#set: in pathway=PWY-7101}} | ||
{{#set: reconstruction category=annotation}} | {{#set: reconstruction category=annotation}} | ||
{{#set: reconstruction source=annotation-saccharina_japonica_genome}} | {{#set: reconstruction source=annotation-saccharina_japonica_genome}} | ||
{{#set: reconstruction tool=pathwaytools}} | {{#set: reconstruction tool=pathwaytools}} | ||
Latest revision as of 14:40, 10 January 2019
Contents
Reaction RXN-13641
- direction:
- REVERSIBLE
- ec number:
- common name:
- β-carotene isomerase
- Synonym(s):
Reaction Formula
- With identifiers:
- With common name(s):
- 1 β-carotene[c] <=> 1 9-cis-β-carotene[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: SJ06689
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: annotation-saccharina_japonica_genome
- Gene: SJ20376
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: annotation-saccharina_japonica_genome
- Gene: SJ18022
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: annotation-saccharina_japonica_genome
Pathways
- PWY-7101, 5-deoxystrigol biosynthesis: PWY-7101
- 1 reactions found over 5 reactions in the full pathway
Reconstruction information
- Category: annotation
- Source: annotation-saccharina_japonica_genome
- Tool: pathwaytools
- Source: annotation-saccharina_japonica_genome
External links
