Difference between revisions of "GTPPYPHOSKIN-RXN"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GTPPYPHOSKIN-RXN GTPPYPHOSKIN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** GTP pyrophosp...") |
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| Line 3: | Line 3: | ||
* direction: | * direction: | ||
** LEFT-TO-RIGHT | ** LEFT-TO-RIGHT | ||
| + | * ec number: | ||
| + | ** [http://enzyme.expasy.org/EC/2.7.6.5 EC-2.7.6.5] | ||
* common name: | * common name: | ||
** GTP pyrophosphokinase | ** GTP pyrophosphokinase | ||
** GTP diphosphokinase | ** GTP diphosphokinase | ||
| − | |||
| − | |||
* Synonym(s): | * Synonym(s): | ||
| Line 18: | Line 18: | ||
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Genes have been associated with this reaction based on different elements listed below. | Genes have been associated with this reaction based on different elements listed below. | ||
| − | |||
| − | |||
| − | |||
| − | |||
* Gene: [[SJ10100]] | * Gene: [[SJ10100]] | ||
** Source: [[annotation-saccharina_japonica_genome]] | ** Source: [[annotation-saccharina_japonica_genome]] | ||
| Line 29: | Line 25: | ||
** Source: [[annotation-saccharina_japonica_genome]] | ** Source: [[annotation-saccharina_japonica_genome]] | ||
*** Assignment: GO-TERM | *** Assignment: GO-TERM | ||
| + | * Gene: [[SJ13961]] | ||
| + | ** Source: [[annotation-saccharina_japonica_genome]] | ||
| + | *** Assignment: EC-NUMBER | ||
| + | ** Source: [[orthology-nannochloropsis_salina]] | ||
* Gene: [[SJ14690]] | * Gene: [[SJ14690]] | ||
** Source: [[annotation-saccharina_japonica_genome]] | ** Source: [[annotation-saccharina_japonica_genome]] | ||
| Line 44: | Line 44: | ||
== External links == | == External links == | ||
* RHEA: | * RHEA: | ||
| − | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id= | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22089 22089] |
* LIGAND-RXN: | * LIGAND-RXN: | ||
** [http://www.genome.jp/dbget-bin/www_bget?R00429 R00429] | ** [http://www.genome.jp/dbget-bin/www_bget?R00429 R00429] | ||
| Line 54: | Line 54: | ||
** [http://www.uniprot.org/uniprot/P52560 P52560] | ** [http://www.uniprot.org/uniprot/P52560 P52560] | ||
{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
| + | {{#set: ec number=EC-2.7.6.5}} | ||
{{#set: common name=GTP pyrophosphokinase}} | {{#set: common name=GTP pyrophosphokinase}} | ||
{{#set: common name=GTP diphosphokinase}} | {{#set: common name=GTP diphosphokinase}} | ||
| − | + | {{#set: gene associated=SJ10100|SJ07200|SJ13961|SJ14690}} | |
| − | {{#set: gene associated= | + | |
{{#set: in pathway=PPGPPMET-PWY}} | {{#set: in pathway=PPGPPMET-PWY}} | ||
{{#set: reconstruction category=orthology|annotation}} | {{#set: reconstruction category=orthology|annotation}} | ||
{{#set: reconstruction source=orthology-nannochloropsis_salina|annotation-saccharina_japonica_genome}} | {{#set: reconstruction source=orthology-nannochloropsis_salina|annotation-saccharina_japonica_genome}} | ||
{{#set: reconstruction tool=pantograph|pathwaytools}} | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
Latest revision as of 15:50, 10 January 2019
Contents
Reaction GTPPYPHOSKIN-RXN
- direction:
- LEFT-TO-RIGHT
- ec number:
- common name:
- GTP pyrophosphokinase
- GTP diphosphokinase
- Synonym(s):
Reaction Formula
- With identifiers:
- With common name(s):
- 1 GTP[c] + 1 ATP[c] => 1 pppGpp[c] + 1 AMP[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: SJ10100
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: orthology-nannochloropsis_salina
- Source: annotation-saccharina_japonica_genome
- Gene: SJ07200
- Source: annotation-saccharina_japonica_genome
- Assignment: GO-TERM
- Source: annotation-saccharina_japonica_genome
- Gene: SJ13961
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: orthology-nannochloropsis_salina
- Source: annotation-saccharina_japonica_genome
- Gene: SJ14690
- Source: annotation-saccharina_japonica_genome
- Assignment: GO-TERM
- Source: annotation-saccharina_japonica_genome
Pathways
- PPGPPMET-PWY, ppGpp biosynthesis: PPGPPMET-PWY
- 5 reactions found over 6 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-nannochloropsis_salina
- Tool: pantograph
- Source: orthology-nannochloropsis_salina
- Category: annotation
- Source: annotation-saccharina_japonica_genome
- Tool: pathwaytools
- Source: annotation-saccharina_japonica_genome
External links
