Difference between revisions of "RXN0-2141"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-2141 RXN0-2141] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-oxoacyl-[acyl-carrier-pro...")
 
 
Line 3: Line 3:
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
−
* common name:
 
−
** 3-oxoacyl-[acyl-carrier-protein] synthase
 
 
* ec number:
 
* ec number:
 +
** [http://enzyme.expasy.org/EC/2.3.1.179 EC-2.3.1.179]
 
** [http://enzyme.expasy.org/EC/2.3.1.41 EC-2.3.1.41]
 
** [http://enzyme.expasy.org/EC/2.3.1.41 EC-2.3.1.41]
 +
* common name:
 +
** 3-oxoacyl-[acyl-carrier-protein] synthase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[PROTON]][c] '''+''' 1 [[Cis-delta-3-decenoyl-ACPs]][c] '''+''' 1 [[MALONYL-ACP]][c] '''=>''' 1 [[ACP]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[b-Keto-cis-D5-dodecenoyl-ACPs]][c]
+
** 1 [[MALONYL-ACP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Cis-delta-3-decenoyl-ACPs]][c] '''=>''' 1 [[b-Keto-cis-D5-dodecenoyl-ACPs]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[ACP]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 H+[c] '''+''' 1 a (3Z)-dec-3-enoyl-[acp][c] '''+''' 1 a malonyl-[acp][c] '''=>''' 1 a holo-[acyl-carrier protein][c] '''+''' 1 CO2[c] '''+''' 1 a (5Z)-3-oxo-dodec-5-enoyl-[acp][c]
+
** 1 a malonyl-[acp][c] '''+''' 1 H+[c] '''+''' 1 a (3Z)-dec-3-enoyl-[acp][c] '''=>''' 1 a (5Z)-3-oxo-dodec-5-enoyl-[acp][c] '''+''' 1 CO2[c] '''+''' 1 a holo-[acyl-carrier protein][c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[SJ00005]]
 
−
** Source: [[orthology-ectocarpus_siliculosus]]
 
 
* Gene: [[SJ04443]]
 
* Gene: [[SJ04443]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
 
** Source: [[orthology-ectocarpus_siliculosus]]
 
** Source: [[orthology-ectocarpus_siliculosus]]
−
* Gene: [[SJ18059]]
 
−
** Source: [[annotation-saccharina_japonica_genome]]
 
−
*** Assignment: GO-TERM
 
 
* Gene: [[SJ10624]]
 
* Gene: [[SJ10624]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
Line 32: Line 28:
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ15984]]
 
−
** Source: [[orthology-ectocarpus_siliculosus]]
 
 
* Gene: [[SJ15983]]
 
* Gene: [[SJ15983]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
* Gene: [[SJ18059]]
 +
** Source: [[annotation-saccharina_japonica_genome]]
 +
*** Assignment: GO-TERM
 +
* Gene: [[SJ00005]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
* Gene: [[SJ15984]]
 
** Source: [[orthology-ectocarpus_siliculosus]]
 
** Source: [[orthology-ectocarpus_siliculosus]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY0-862]], (5Z)-dodec-5-enoate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-862 PWY0-862]
+
* [[PWY-7858]], (5Z)-dodec-5-enoate biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7858 PWY-7858]
 +
** '''4''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY0-862]], (5Z)-dodec-5-enoate biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-862 PWY0-862]
 
** '''5''' reactions found over '''6''' reactions in the full pathway
 
** '''5''' reactions found over '''6''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
Line 50: Line 53:
 
== External links  ==
 
== External links  ==
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=3-oxoacyl-[acyl-carrier-protein] synthase}}
+
{{#set: ec number=EC-2.3.1.179}}
 
{{#set: ec number=EC-2.3.1.41}}
 
{{#set: ec number=EC-2.3.1.41}}
−
{{#set: gene associated=SJ00005|SJ04443|SJ18059|SJ10624|SJ06617|SJ15984|SJ15983}}
+
{{#set: common name=3-oxoacyl-[acyl-carrier-protein] synthase}}
−
{{#set: in pathway=PWY0-862}}
+
{{#set: gene associated=SJ04443|SJ10624|SJ06617|SJ15983|SJ18059|SJ00005|SJ15984}}
 +
{{#set: in pathway=PWY-7858|PWY0-862}}
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction source=orthology-ectocarpus_siliculosus|annotation-saccharina_japonica_genome}}
 
{{#set: reconstruction source=orthology-ectocarpus_siliculosus|annotation-saccharina_japonica_genome}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 14:53, 10 January 2019

Reaction RXN0-2141

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • common name:
    • 3-oxoacyl-[acyl-carrier-protein] synthase
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7858, (5Z)-dodec-5-enoate biosynthesis II: PWY-7858
    • 4 reactions found over 6 reactions in the full pathway
  • PWY0-862, (5Z)-dodec-5-enoate biosynthesis I: PWY0-862
    • 5 reactions found over 6 reactions in the full pathway

Reconstruction information

External links

"3-oxoacyl-[acyl-carrier-protein] synthase" cannot be used as a page name in this wiki.



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