Difference between revisions of "RXN-10815"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10815 RXN-10815] == * direction: ** LEFT-TO-RIGHT * common name: ** 2-oxo-3-phenylpropanoate di...") |
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| Line 3: | Line 3: | ||
* direction: | * direction: | ||
** LEFT-TO-RIGHT | ** LEFT-TO-RIGHT | ||
| + | * ec number: | ||
| + | ** [http://enzyme.expasy.org/EC/1.13.11.27 EC-1.13.11.27] | ||
* common name: | * common name: | ||
** 2-oxo-3-phenylpropanoate dioxygenase | ** 2-oxo-3-phenylpropanoate dioxygenase | ||
** phenylpyruvate dioxygenase | ** phenylpyruvate dioxygenase | ||
| − | |||
| − | |||
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
| − | ** 1 [[ | + | ** 1 [[PHENYL-PYRUVATE]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[CPD-11495]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] |
* With common name(s): | * With common name(s): | ||
| − | ** 1 | + | ** 1 keto-phenylpyruvate[c] '''+''' 1 oxygen[c] '''=>''' 1 (2-hydroxyphenyl)acetate[c] '''+''' 1 CO2[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
| Line 21: | Line 21: | ||
** Source: [[annotation-saccharina_japonica_genome]] | ** Source: [[annotation-saccharina_japonica_genome]] | ||
*** Assignment: EC-NUMBER | *** Assignment: EC-NUMBER | ||
| − | |||
** Source: [[orthology-arabidopsis_thaliana]] | ** Source: [[orthology-arabidopsis_thaliana]] | ||
| + | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
* Gene: [[SJ08954]] | * Gene: [[SJ08954]] | ||
** Source: [[annotation-saccharina_japonica_genome]] | ** Source: [[annotation-saccharina_japonica_genome]] | ||
| Line 28: | Line 28: | ||
== Pathways == | == Pathways == | ||
* [[PWY-6318]], L-phenylalanine degradation IV (mammalian, via side chain): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6318 PWY-6318] | * [[PWY-6318]], L-phenylalanine degradation IV (mammalian, via side chain): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6318 PWY-6318] | ||
| − | ** ''' | + | ** '''4''' reactions found over '''9''' reactions in the full pathway |
== Reconstruction information == | == Reconstruction information == | ||
* Category: [[orthology]] | * Category: [[orthology]] | ||
| Line 40: | Line 40: | ||
== External links == | == External links == | ||
* RHEA: | * RHEA: | ||
| − | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id= | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=31108 31108] |
* LIGAND-RXN: | * LIGAND-RXN: | ||
** [http://www.genome.jp/dbget-bin/www_bget?R01372 R01372] | ** [http://www.genome.jp/dbget-bin/www_bget?R01372 R01372] | ||
{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
| + | {{#set: ec number=EC-1.13.11.27}} | ||
{{#set: common name=2-oxo-3-phenylpropanoate dioxygenase}} | {{#set: common name=2-oxo-3-phenylpropanoate dioxygenase}} | ||
{{#set: common name=phenylpyruvate dioxygenase}} | {{#set: common name=phenylpyruvate dioxygenase}} | ||
| − | |||
{{#set: gene associated=SJ08953|SJ08954}} | {{#set: gene associated=SJ08953|SJ08954}} | ||
{{#set: in pathway=PWY-6318}} | {{#set: in pathway=PWY-6318}} | ||
{{#set: reconstruction category=orthology|annotation}} | {{#set: reconstruction category=orthology|annotation}} | ||
| − | {{#set: reconstruction source=orthology-arabidopsis_thaliana | + | {{#set: reconstruction source=orthology-arabidopsis_thaliana|annotation-saccharina_japonica_genome|orthology-ectocarpus_siliculosus}} |
{{#set: reconstruction tool=pantograph|pathwaytools}} | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
Latest revision as of 15:57, 10 January 2019
Contents
Reaction RXN-10815
- direction:
- LEFT-TO-RIGHT
- ec number:
- common name:
- 2-oxo-3-phenylpropanoate dioxygenase
- phenylpyruvate dioxygenase
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 PHENYL-PYRUVATE[c] + 1 OXYGEN-MOLECULE[c] => 1 CPD-11495[c] + 1 CARBON-DIOXIDE[c]
- With common name(s):
- 1 keto-phenylpyruvate[c] + 1 oxygen[c] => 1 (2-hydroxyphenyl)acetate[c] + 1 CO2[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: SJ08953
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: orthology-arabidopsis_thaliana
- Source: orthology-ectocarpus_siliculosus
- Source: annotation-saccharina_japonica_genome
- Gene: SJ08954
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: annotation-saccharina_japonica_genome
Pathways
- PWY-6318, L-phenylalanine degradation IV (mammalian, via side chain): PWY-6318
- 4 reactions found over 9 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-arabidopsis_thaliana
- Tool: pantograph
- Source: orthology-ectocarpus_siliculosus
- Tool: pantograph
- Source: orthology-arabidopsis_thaliana
- Category: annotation
- Source: annotation-saccharina_japonica_genome
- Tool: pathwaytools
- Source: annotation-saccharina_japonica_genome
External links
