Difference between revisions of "MALIC-NADP-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=MALIC-NADP-RXN MALIC-NADP-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** oxaloacetate deca...")
 
 
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* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
−
* common name:
 
−
** oxaloacetate decarboxylase
 
−
** malate dehydrogenase
 
 
* ec number:
 
* ec number:
 
** [http://enzyme.expasy.org/EC/1.1.1.40 EC-1.1.1.40]
 
** [http://enzyme.expasy.org/EC/1.1.1.40 EC-1.1.1.40]
 +
* common name:
 +
** malate dehydrogenase
 +
** oxaloacetate decarboxylase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[MAL]][c] '''+''' 1 [[NADP]][c] '''=>''' 1 [[PYRUVATE]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[NADPH]][c]
+
** 1 [[MAL]][c] '''+''' 1 [[NADP]][c] '''=>''' 1 [[NADPH]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[PYRUVATE]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 (S)-malate[c] '''+''' 1 NADP+[c] '''=>''' 1 pyruvate[c] '''+''' 1 CO2[c] '''+''' 1 NADPH[c]
+
** 1 (S)-malate[c] '''+''' 1 NADP+[c] '''=>''' 1 NADPH[c] '''+''' 1 CO2[c] '''+''' 1 pyruvate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[SJ11643]]
 
−
** Source: [[annotation-saccharina_japonica_genome]]
 
−
*** Assignment: EC-NUMBER
 
−
** Source: [[orthology-ectocarpus_siliculosus]]
 
 
* Gene: [[SJ14191]]
 
* Gene: [[SJ14191]]
 
** Source: [[orthology-arabidopsis_thaliana]]
 
** Source: [[orthology-arabidopsis_thaliana]]
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** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
 +
* Gene: [[SJ11643]]
 +
** Source: [[annotation-saccharina_japonica_genome]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 
== Pathways  ==
 
== Pathways  ==
 
* [[PWY-241]], C4 photosynthetic carbon assimilation cycle, NADP-ME type: [http://metacyc.org/META/NEW-IMAGE?object=PWY-241 PWY-241]
 
* [[PWY-241]], C4 photosynthetic carbon assimilation cycle, NADP-ME type: [http://metacyc.org/META/NEW-IMAGE?object=PWY-241 PWY-241]
 
** '''5''' reactions found over '''5''' reactions in the full pathway
 
** '''5''' reactions found over '''5''' reactions in the full pathway
−
* [[GLUCONEO-PWY]], gluconeogenesis I: [http://metacyc.org/META/NEW-IMAGE?object=GLUCONEO-PWY GLUCONEO-PWY]
 
−
** '''13''' reactions found over '''13''' reactions in the full pathway
 
 
* [[PWY-7117]], C4 photosynthetic carbon assimilation cycle, PEPCK type: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7117 PWY-7117]
 
* [[PWY-7117]], C4 photosynthetic carbon assimilation cycle, PEPCK type: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7117 PWY-7117]
 
** '''10''' reactions found over '''10''' reactions in the full pathway
 
** '''10''' reactions found over '''10''' reactions in the full pathway
 +
* [[GLUCONEO-PWY]], gluconeogenesis I: [http://metacyc.org/META/NEW-IMAGE?object=GLUCONEO-PWY GLUCONEO-PWY]
 +
** '''12''' reactions found over '''13''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
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== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18253 18253]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18254 18254]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
 
** [http://www.genome.jp/dbget-bin/www_bget?R00216 R00216]
 
** [http://www.genome.jp/dbget-bin/www_bget?R00216 R00216]
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** [http://www.uniprot.org/uniprot/Q42889 Q42889]
 
** [http://www.uniprot.org/uniprot/Q42889 Q42889]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=oxaloacetate decarboxylase}}
 
−
{{#set: common name=malate dehydrogenase}}
 
 
{{#set: ec number=EC-1.1.1.40}}
 
{{#set: ec number=EC-1.1.1.40}}
−
{{#set: gene associated=SJ11643|SJ14191|SJ13180}}
+
{{#set: common name=malate dehydrogenase}}
−
{{#set: in pathway=PWY-241|GLUCONEO-PWY|PWY-7117}}
+
{{#set: common name=oxaloacetate decarboxylase}}
 +
{{#set: gene associated=SJ14191|SJ13180|SJ11643}}
 +
{{#set: in pathway=PWY-241|PWY-7117|GLUCONEO-PWY}}
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction source=orthology-arabidopsis_thaliana|orthology-ectocarpus_siliculosus|annotation-saccharina_japonica_genome}}
+
{{#set: reconstruction source=orthology-arabidopsis_thaliana|annotation-saccharina_japonica_genome|orthology-ectocarpus_siliculosus}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 16:00, 10 January 2019

Reaction MALIC-NADP-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • common name:
    • malate dehydrogenase
    • oxaloacetate decarboxylase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 (S)-malate[c] + 1 NADP+[c] => 1 NADPH[c] + 1 CO2[c] + 1 pyruvate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-241, C4 photosynthetic carbon assimilation cycle, NADP-ME type: PWY-241
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-7117, C4 photosynthetic carbon assimilation cycle, PEPCK type: PWY-7117
    • 10 reactions found over 10 reactions in the full pathway
  • GLUCONEO-PWY, gluconeogenesis I: GLUCONEO-PWY
    • 12 reactions found over 13 reactions in the full pathway

Reconstruction information

External links





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