Difference between revisions of "RXN-9524"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9524 RXN-9524] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-oxo-octanoyl-[acyl-carrier...")
 
 
Line 3: Line 3:
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
−
* common name:
 
−
** 3-oxo-octanoyl-[acyl-carrier protein] reductase
 
−
** fatty acid synthase
 
−
** (R)-3-hydroxyoctanoyl-[acp] reductase
 
 
* ec number:
 
* ec number:
 
** [http://enzyme.expasy.org/EC/2.3.1.86 EC-2.3.1.86]
 
** [http://enzyme.expasy.org/EC/2.3.1.86 EC-2.3.1.86]
 
** [http://enzyme.expasy.org/EC/2.3.1.85 EC-2.3.1.85]
 
** [http://enzyme.expasy.org/EC/2.3.1.85 EC-2.3.1.85]
 
** [http://enzyme.expasy.org/EC/1.1.1.100 EC-1.1.1.100]
 
** [http://enzyme.expasy.org/EC/1.1.1.100 EC-1.1.1.100]
 +
* common name:
 +
** 3-oxo-octanoyl-[acyl-carrier protein] reductase
 +
** fatty acid synthase
 +
** (R)-3-hydroxyoctanoyl-[acp] reductase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[PROTON]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[3-Oxo-octanoyl-ACPs]][c] '''=>''' 1 [[3-Hydroxy-octanoyl-ACPs]][c] '''+''' 1 [[NADP]][c]
+
** 1 [[PROTON]][c] '''+''' 1 [[3-Oxo-octanoyl-ACPs]][c] '''+''' 1 [[NADPH]][c] '''=>''' 1 [[3-Hydroxy-octanoyl-ACPs]][c] '''+''' 1 [[NADP]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 H+[c] '''+''' 1 NADPH[c] '''+''' 1 a 3-oxo-octanoyl-[acp][c] '''=>''' 1 a (3R)-3-hydroxyoctanoyl-[acp][c] '''+''' 1 NADP+[c]
+
** 1 H+[c] '''+''' 1 a 3-oxo-octanoyl-[acp][c] '''+''' 1 NADPH[c] '''=>''' 1 a (3R)-3-hydroxyoctanoyl-[acp][c] '''+''' 1 NADP+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[SJ04769]]
+
* Gene: [[SJ15785]]
 +
** Source: [[orthology-nannochloropsis_salina]]
 +
* Gene: [[SJ12149]]
 +
** Source: [[orthology-nannochloropsis_salina]]
 +
* Gene: [[SJ18059]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ06616]]
+
* Gene: [[SJ00320]]
−
** Source: [[annotation-saccharina_japonica_genome]]
+
−
*** Assignment: GO-TERM
+
−
* Gene: [[SJ19629]]
+
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
Line 34: Line 35:
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
 
** Source: [[orthology-nannochloropsis_salina]]
 
** Source: [[orthology-nannochloropsis_salina]]
−
* Gene: [[SJ10624]]
+
* Gene: [[SJ13014]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
−
*** Assignment: GO-TERM
+
*** Assignment: EC-NUMBER
−
* Gene: [[SJ06944]]
+
** Source: [[orthology-nannochloropsis_salina]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
* Gene: [[SJ15983]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ04443]]
+
* Gene: [[SJ06617]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ04229]]
+
* Gene: [[SJ19629]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
−
*** Assignment: EC-NUMBER
+
*** Assignment: GO-TERM
−
** Source: [[orthology-nannochloropsis_salina]]
+
 
* Gene: [[SJ03883]]
 
* Gene: [[SJ03883]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ15983]]
+
* Gene: [[SJ10624]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ12149]]
+
* Gene: [[SJ06944]]
−
** Source: [[orthology-nannochloropsis_salina]]
+
−
* Gene: [[SJ13014]]
+
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
−
*** Assignment: EC-NUMBER
+
*** Assignment: GO-TERM
−
** Source: [[orthology-ectocarpus_siliculosus]]
+
* Gene: [[SJ00613]]
−
** Source: [[orthology-nannochloropsis_salina]]
+
−
* Gene: [[SJ15785]]
+
−
** Source: [[orthology-nannochloropsis_salina]]
+
−
* Gene: [[SJ11672]]
+
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ00320]]
+
* Gene: [[SJ06616]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ00613]]
+
* Gene: [[SJ04443]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ18059]]
+
* Gene: [[SJ04769]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ06617]]
+
* Gene: [[SJ04229]]
 +
** Source: [[annotation-saccharina_japonica_genome]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-nannochloropsis_salina]]
 +
* Gene: [[SJ11672]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
Line 84: Line 84:
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
−
** Source: [[orthology-ectocarpus_siliculosus]]
 
−
*** Tool: [[pantograph]]
 
 
** Source: [[orthology-nannochloropsis_salina]]
 
** Source: [[orthology-nannochloropsis_salina]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 
*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
 
* Category: [[annotation]]
 
* Category: [[annotation]]
Line 93: Line 93:
 
== External links  ==
 
== External links  ==
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=3-oxo-octanoyl-[acyl-carrier protein] reductase}}
 
−
{{#set: common name=fatty acid synthase}}
 
−
{{#set: common name=(R)-3-hydroxyoctanoyl-[acp] reductase}}
 
 
{{#set: ec number=EC-2.3.1.86}}
 
{{#set: ec number=EC-2.3.1.86}}
 
{{#set: ec number=EC-2.3.1.85}}
 
{{#set: ec number=EC-2.3.1.85}}
 
{{#set: ec number=EC-1.1.1.100}}
 
{{#set: ec number=EC-1.1.1.100}}
−
{{#set: gene associated=SJ04769|SJ06616|SJ19629|SJ17743|SJ10624|SJ06944|SJ04443|SJ04229|SJ03883|SJ15983|SJ12149|SJ13014|SJ15785|SJ11672|SJ00320|SJ00613|SJ18059|SJ06617}}
+
{{#set: common name=3-oxo-octanoyl-[acyl-carrier protein] reductase}}
 +
{{#set: common name=fatty acid synthase}}
 +
{{#set: common name=(R)-3-hydroxyoctanoyl-[acp] reductase}}
 +
{{#set: gene associated=SJ15785|SJ12149|SJ18059|SJ00320|SJ17743|SJ13014|SJ15983|SJ06617|SJ19629|SJ03883|SJ10624|SJ06944|SJ00613|SJ06616|SJ04443|SJ04769|SJ04229|SJ11672}}
 
{{#set: in pathway=PWY-5971|PWY-5994}}
 
{{#set: in pathway=PWY-5971|PWY-5994}}
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction source=orthology-ectocarpus_siliculosus|orthology-nannochloropsis_salina|annotation-saccharina_japonica_genome}}
 
{{#set: reconstruction source=orthology-ectocarpus_siliculosus|orthology-nannochloropsis_salina|annotation-saccharina_japonica_genome}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 15:01, 10 January 2019

Reaction RXN-9524

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • common name:
    • 3-oxo-octanoyl-[acyl-carrier protein] reductase
    • fatty acid synthase
    • (R)-3-hydroxyoctanoyl-[acp] reductase
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5971, palmitate biosynthesis II (bacteria and plants): PWY-5971
    • 31 reactions found over 31 reactions in the full pathway
  • PWY-5994, palmitate biosynthesis I (animals and fungi): PWY-5994
    • 31 reactions found over 31 reactions in the full pathway

Reconstruction information

External links

"3-oxo-octanoyl-[acyl-carrier protein] reductase" cannot be used as a page name in this wiki.
"(R)-3-hydroxyoctanoyl-[acp] reductase" cannot be used as a page name in this wiki.



Retrieved from "http://gem-aureme.irisa.fr/sjapgem/index.php?title=RXN-9524&oldid=22043"