Difference between revisions of "RXN-8347"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8347 RXN-8347] == * direction: ** LEFT-TO-RIGHT * common name: ** α-linolenate Δ6-d...") |
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| Line 3: | Line 3: | ||
* direction: | * direction: | ||
** LEFT-TO-RIGHT | ** LEFT-TO-RIGHT | ||
| + | * ec number: | ||
| + | ** [http://enzyme.expasy.org/EC/1.14.19.47 EC-1.14.19.47] | ||
* common name: | * common name: | ||
** α-linolenate Δ6-desaturase | ** α-linolenate Δ6-desaturase | ||
** α-linolenoyl-lipid 6-desaturase | ** α-linolenoyl-lipid 6-desaturase | ||
| − | |||
| − | |||
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
| − | ** 1 [[ | + | ** 1 [[Alpha-linolenoyl-groups]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 2 [[FERROCYTOCHROME-B5]][c] '''+''' 2 [[PROTON]][c] '''=>''' 1 [[CPD-17278]][c] '''+''' 2 [[FERRICYTOCHROME-B5]][c] '''+''' 2 [[WATER]][c] |
* With common name(s): | * With common name(s): | ||
| − | ** 1 | + | ** 1 a [glycerolipid]-α-linolenate[c] '''+''' 1 oxygen[c] '''+''' 2 a ferrocytochrome b5[c] '''+''' 2 H+[c] '''=>''' 1 a [glycerolipid]-stearidonate[c] '''+''' 2 a ferricytochrome b5[c] '''+''' 2 H2O[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
| Line 22: | Line 22: | ||
*** Assignment: EC-NUMBER | *** Assignment: EC-NUMBER | ||
== Pathways == | == Pathways == | ||
| − | |||
| − | |||
* [[PWY-6958]], icosapentaenoate biosynthesis I (lower eukaryotes): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6958 PWY-6958] | * [[PWY-6958]], icosapentaenoate biosynthesis I (lower eukaryotes): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6958 PWY-6958] | ||
** '''5''' reactions found over '''8''' reactions in the full pathway | ** '''5''' reactions found over '''8''' reactions in the full pathway | ||
| + | * [[PWY-6603]], dicranin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6603 PWY-6603] | ||
| + | ** '''4''' reactions found over '''4''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
* Category: [[annotation]] | * Category: [[annotation]] | ||
| Line 31: | Line 31: | ||
*** Tool: [[pathwaytools]] | *** Tool: [[pathwaytools]] | ||
== External links == | == External links == | ||
| + | * RHEA: | ||
| + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=46289 46289] | ||
* LIGAND-RXN: | * LIGAND-RXN: | ||
** [http://www.genome.jp/dbget-bin/www_bget?R07861 R07861] | ** [http://www.genome.jp/dbget-bin/www_bget?R07861 R07861] | ||
{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
| + | {{#set: ec number=EC-1.14.19.47}} | ||
{{#set: common name=α-linolenate Δ6-desaturase}} | {{#set: common name=α-linolenate Δ6-desaturase}} | ||
{{#set: common name=α-linolenoyl-lipid 6-desaturase}} | {{#set: common name=α-linolenoyl-lipid 6-desaturase}} | ||
| − | |||
{{#set: gene associated=SJ05483}} | {{#set: gene associated=SJ05483}} | ||
| − | {{#set: in pathway=PWY- | + | {{#set: in pathway=PWY-6958|PWY-6603}} |
{{#set: reconstruction category=annotation}} | {{#set: reconstruction category=annotation}} | ||
{{#set: reconstruction source=annotation-saccharina_japonica_genome}} | {{#set: reconstruction source=annotation-saccharina_japonica_genome}} | ||
{{#set: reconstruction tool=pathwaytools}} | {{#set: reconstruction tool=pathwaytools}} | ||
Latest revision as of 16:02, 10 January 2019
Contents
Reaction RXN-8347
- direction:
- LEFT-TO-RIGHT
- ec number:
- common name:
- α-linolenate Δ6-desaturase
- α-linolenoyl-lipid 6-desaturase
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 Alpha-linolenoyl-groups[c] + 1 OXYGEN-MOLECULE[c] + 2 FERROCYTOCHROME-B5[c] + 2 PROTON[c] => 1 CPD-17278[c] + 2 FERRICYTOCHROME-B5[c] + 2 WATER[c]
- With common name(s):
- 1 a [glycerolipid]-α-linolenate[c] + 1 oxygen[c] + 2 a ferrocytochrome b5[c] + 2 H+[c] => 1 a [glycerolipid]-stearidonate[c] + 2 a ferricytochrome b5[c] + 2 H2O[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: SJ05483
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: annotation-saccharina_japonica_genome
Pathways
- PWY-6958, icosapentaenoate biosynthesis I (lower eukaryotes): PWY-6958
- 5 reactions found over 8 reactions in the full pathway
- PWY-6603, dicranin biosynthesis: PWY-6603
- 4 reactions found over 4 reactions in the full pathway
Reconstruction information
- Category: annotation
- Source: annotation-saccharina_japonica_genome
- Tool: pathwaytools
- Source: annotation-saccharina_japonica_genome
External links
